RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SYTL5Q8TDW5 730 aaPredicted RBP9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CNBD2Q96M20 576 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 TUBB6Q9BUF5 446 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 CEP41Q9BYV8 373 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 IMPG2Q9BZV3 1241 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 GRIP2Q9C0E4 1043 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 VCX3BQ9H321 246 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 ZNF358Q9NW07 568 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 TMX2Q9Y320 296 aa9.95□□□□□ -0.82
SMC1B-202ENST00000404354 A0A088AWK7 358 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 HNRNPCL1O60812 293 aaKnown RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 EDN1P05305 212 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 VCLP18206 1134 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 KDELR1P24390 212 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 SLC18A1P54219 525 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 C15orf59Q2T9L4 293 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PHF13Q86YI8 300 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 ZNF398Q8TD17 642 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 SLC44A1Q8WWI5 657 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 NKD2Q969F2 451 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 WWP1Q9H0M0 922 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 CISHQ9NSE2 258 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 DRG1Q9Y295 367 aaKnown RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 CAPN14A8MX76 684 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 E9PBE3 544 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 KLHL41O60662 606 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 VAV1P15498 845 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 GTF2A2P52657 109 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 MSLNQ13421 630 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 TMED1Q13445 227 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 KRT72Q14CN4 511 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 TRMT5Q32P41 509 aaKnown RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PTPN20Q4JDL3 420 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 EFHC1Q5JVL4 640 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 RBM44Q6ZP01 1051 aaKnown RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 ENOSF1Q7L5Y1 443 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PTAR1Q7Z6K3 402 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 MYLK4Q86YV6 388 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 THNSL1Q8IYQ7 743 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 TMEM35BQ8NCS4 154 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 UBA3Q8TBC4 463 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PPP2R3CQ969Q6 453 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 WNK4Q96J92 1243 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PPP1R16BQ96T49 567 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 TMEM165Q9HC07 324 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 POLIQ9UNA4 740 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 A8MXQ7 604 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 NEMP1O14524 444 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 MAGEB3O15480 346 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 DCXO43602 365 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 KRT37O76014 449 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 MIPP30301 263 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 C1QBPQ07021 282 aaKnown RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 TTLL12Q14166 644 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 TMEM132AQ24JP5 1023 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PPM1JQ5JR12 505 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 SLC27A3Q5K4L6 730 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 DACT2Q5SW24 774 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 FBXL19Q6PCT2 694 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 DHDDSQ86SQ9 333 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 CCDC60Q8IWA6 550 aaPredicted RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 NAT14Q8WUY8 206 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 ALKBH8Q96BT7 664 aaKnown RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 LIN28AQ9H9Z2 209 aaKnown RBP9.94□□□□□ -0.82
SMC1B-202ENST00000404354 S100A14Q9HCY8 104 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 CYTH4Q9UIA0 394 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PLA2G4CQ9UP65 541 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 PLLPQ9Y342 182 aa9.94□□□□□ -0.82
SMC1B-202ENST00000404354 CNTNAP2Q9UHC6 1331 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 AIM2O14862 343 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 EXTL3O43909 919 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 ADCY3O60266 1144 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PEX10O60683 326 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 DNAJC6O75061 913 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 SNRPAP09012 282 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 DYNC1I2Q13409 638 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 BAATQ14032 418 aaPredicted RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PDK3Q15120 406 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 NET1Q7Z628 596 aaPredicted RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 SLC26A11Q86WA9 606 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 ZNF677Q86XU0 584 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 C4orf19Q8IY42 314 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PHTF2Q8N3S3 785 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 FBXL18Q96ME1 805 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 IDI2Q9BXS1 227 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 OXCT2Q9BYC2 517 aaPredicted RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 KLHL4Q9C0H6 718 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 RNPEPQ9H4A4 650 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 SOX13Q9UN79 622 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 INPP5FQ9Y2H2 1132 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 RIPK3Q9Y572 518 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 CENPFP49454 3210 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 BUD23O43709 281 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 DHRS4L1P0CG22 281 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 SRGAP2CP0DJJ0 459 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 RBL1P28749 1068 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms