RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 RBAKQ9NYW8 714 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CDH9Q9ULB4 789 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
SPTLC1P3-201ENST00000403408 WASH3PC4AMC7 463 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ATXN1LP0C7T5 689 aaKnown RBP12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 MBL2P11226 248 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 WARSP23381 471 aaKnown RBP12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 NTSR1P30989 418 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SLC14A1Q13336 389 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 HNRNPDQ14103 355 aaKnown RBP12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PLEKHG6Q3KR16 790 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 C10orf76Q5T2E6 689 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 C4orf50Q6ZRC1 276 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DYMQ7RTS9 669 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TMPRSS7Q7RTY8 843 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 MYCBPAPQ8TBZ2 947 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DNAJC19Q96DA6 116 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CCSER2Q9H7U1 834 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
SPTLC1P3-201ENST00000403408 E2F8A0AVK6 867 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KCNJ18B7U540 433 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SLC9A3R1O14745 358 aaPredicted RBP12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SYPP08247 313 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DDIT3P35638 169 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 UBA7P41226 1012 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PDE6CP51160 858 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GAD2Q05329 585 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CYP4F3Q08477 520 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 L1TD1Q5T7N2 865 aaKnown RBP12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GLIS3Q8NEA6 775 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SCAMP5Q8TAC9 235 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 LARP4BQ92615 738 aaKnown RBP12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 HPDLQ96IR7 371 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 MRGPRX1Q96LB2 322 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 AK8Q96MA6 479 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CEP295NLQ96MC4 621 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GABRG3Q99928 467 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 B3GNT5Q9BYG0 378 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SPHK2Q9NRA0 654 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 INTS13Q9NVM9 706 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CHORDC1Q9UHD1 332 aaPredicted RBP12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 BTBD3Q9Y2F9 522 aa12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 FNDC3AQ9Y2H6 1198 aaKnown RBP12.66□□□□□ -0.38
SPTLC1P3-201ENST00000403408 TMEM131Q92545 1883 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 SLC26A4O43511 780 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CST3P01034 146 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 IFRD2Q12894 506 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 POSTNQ15063 836 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DBX2Q6ZNG2 339 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PAQR9Q6ZVX9 377 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 RGL4Q8IZJ4 473 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 C1orf216Q8TAB5 229 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KCNV2Q8TDN2 545 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 CACTINQ8WUQ7 758 aaKnown RBP12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DNASE2BQ8WZ79 361 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 HVCN1Q96D96 273 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 EPSTI1Q96J88 318 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KCNK16Q96T55 309 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 KIAA1522Q9P206 1035 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DEC1Q9P2X7 70 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PCDHB9Q9Y5E1 797 aa12.65□□□□□ -0.38
SPTLC1P3-201ENST00000403408 PIEZO2Q9H5I5 2752 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 COL12A1Q99715 3063 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 FAM149AA5PLN7 773 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TRABD2BA6NFA1 517 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TRIM66O15016 1216 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZDHHC11BP0C7U3 371 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PTPN1P18031 435 aaKnown RBP12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GARTP22102 1010 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ANXA13P27216 316 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PPP3CCP48454 512 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 RABEPKQ7Z6M1 372 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CBWD2Q8IUF1 395 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZCCHC9Q8N567 271 aaKnown RBP12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 WSB2Q9NYS7 404 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 IL37Q9NZH6 218 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 GMIPQ9P107 970 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TBC1D14Q9P2M4 693 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CKAP5Q14008 2032 aa12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ARID1BQ8NFD5 2236 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1P3-201ENST00000403408 MYH10P35580 1976 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 A0A087WV48 116 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 CILPO75339 1184 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 ZNF217O75362 1048 aa12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
SPTLC1P3-201ENST00000403408 TBX18O95935 607 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms