RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 SLC26A11Q86WA9 606 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 GALNT15Q8N3T1 639 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 RNF149Q8NC42 400 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 SLC35B2Q8TB61 432 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 ECSITQ9BQ95 431 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 C20orf27Q9GZN8 174 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 TXNDC16Q9P2K2 825 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 TAGLN3Q9UI15 199 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 APOBEC2Q9Y235 224 aaKnown RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 ADAMTSL1Q8N6G6 1762 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 BCAR1P56945 870 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 SNRPFP62306 86 aaKnown RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 USP4Q13107 963 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 MED21Q13503 144 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 LRRC23Q53EV4 343 aaPredicted RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 WDR75Q8IWA0 830 aaKnown RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 TTC13Q8NBP0 860 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 B4GALNT2Q8NHY0 566 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 NKD2Q969F2 451 aaPredicted RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 SKA1Q96BD8 255 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 DNAJC1Q96KC8 554 aaKnown RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 FBXL18Q96ME1 805 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 DDX18Q9NVP1 670 aaKnown RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 E9PBE3 544 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 AIM2O14862 343 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 KLHL41O60662 606 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 HNRNPCL1O60812 293 aaKnown RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 OR6B1O95007 311 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 EDN1P05305 212 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 DUOXA2Q1HG44 320 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 RELL1Q8IUW5 271 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 MFN1Q8IWA4 741 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 ST13P4Q8IZP2 240 aaPredicted RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 MPP5Q8N3R9 675 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 GALNT4Q8N4A0 578 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 C7orf31Q8N865 590 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 VCPIP1Q96JH7 1222 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 GJD4Q96KN9 370 aaPredicted RBP9.53□□□□□ -0.88
HPS4-203ENST00000402105 ANKRD27Q96NW4 1050 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 MAGEB5Q9BZ81 275 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 ST6GALNAC4Q9H4F1 302 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 NHSQ6T4R5 1651 aa9.52□□□□□ -0.88
HPS4-203ENST00000402105 ITM2AO43736 263 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 RNASEH1O60930 286 aaKnown RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 HMGCRP04035 888 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 PYGLP06737 847 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 GTF2A2P52657 109 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 CDC16Q13042 620 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 FASTKD1Q53R41 847 aaKnown RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 OLFML2BQ68BL8 750 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 IYDQ6PHW0 289 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 TRIM50Q86XT4 487 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 HPS6Q86YV9 775 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 DEFB107AQ8IZN7 70 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 ARFGAP1Q8N6T3 406 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 FAM136AQ96C01 138 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 CGRRF1Q99675 332 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 NIF3L1Q9GZT8 377 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 PNPOQ9NVS9 261 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 STRIP2Q9ULQ0 834 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 FIS1Q9Y3D6 152 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 FARP1Q9Y4F1 1045 aaPredicted RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 MYOCOSA0A1B0GUC4 107 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 TRAFD1O14545 582 aaPredicted RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 KRT38O76015 456 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 CSH1P0DML2 217 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 CSH2P0DML3 217 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 PEX2P28328 305 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 RXRBP28702 533 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 PTGER2P43116 358 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 NXNQ6DKJ4 435 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 SLFN12LQ6IEE8 588 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 FAM43BQ6ZT52 329 aaPredicted RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 TRAPPC12Q8WVT3 735 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 SLC44A1Q8WWI5 657 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 PRPF31Q8WWY3 499 aaKnown RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 ABTB1Q969K4 478 aaPredicted RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 CLMNQ96JQ2 1002 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 CENPKQ9BS16 269 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 UNKQ9C0B0 810 aaKnown RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 HMGXB4Q9UGU5 601 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 CYTH4Q9UIA0 394 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 XIRP1Q702N8 1843 aaKnown RBP9.52□□□□□ -0.89
HPS4-203ENST00000402105 DCXO43602 365 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 TNNC2P02585 160 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 ERBB2P04626 1255 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 PHKA2P46019 1235 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 RPS6KA3P51812 740 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 HMGCS2P54868 508 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 AQP4P55087 323 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 OCRLQ01968 901 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 FSTL1Q12841 308 aa9.52□□□□□ -0.89
HPS4-203ENST00000402105 CNPY1Q3B7I2 92 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms