RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 SCFD1Q8WVM8 642 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 GATA6Q92908 595 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 KIAA1586Q9HCI6 787 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 GMIPQ9P107 970 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 LOC400499M0QZD8 3231 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 CACNA1EQ15878 2313 aa12.66□□□□□ -0.38
LINC00544-201ENST00000400540 CELSR3Q9NYQ7 3312 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 E2F8A0AVK6 867 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 HYAL3O43820 417 aaPredicted RBP12.65□□□□□ -0.38
LINC00544-201ENST00000400540 TULP3O75386 442 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 GABRG2P18507 467 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 TNFRSF4P43489 277 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 GAD2Q05329 585 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 LMAN2Q12907 356 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 ORC1Q13415 861 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 TRPC3Q13507 836 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 STK38Q15208 465 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 HSF5Q4G112 596 aaPredicted RBP12.65□□□□□ -0.38
LINC00544-201ENST00000400540 HECTD3Q5T447 861 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 TMEM25Q86YD3 366 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 SYT12Q8IV01 421 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 ZNF513Q8N8E2 541 aaPredicted RBP12.65□□□□□ -0.38
LINC00544-201ENST00000400540 KDF1Q8NAX2 398 aaPredicted RBP12.65□□□□□ -0.38
LINC00544-201ENST00000400540 XXYLT1Q8NBI6 393 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 LINC00301Q8NCQ3 95 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 PDZD8Q8NEN9 1154 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 MED10Q9BTT4 135 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 NUSAP1Q9BXS6 441 aaKnown RBP12.65□□□□□ -0.38
LINC00544-201ENST00000400540 SDCBP2Q9H190 292 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 CALCOCO1Q9P1Z2 691 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 PILRBQ9UKJ0 227 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 SH3BP1Q9Y3L3 701 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 TMEM131Q92545 1883 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 PTPRBP23467 1997 aa12.65□□□□□ -0.38
LINC00544-201ENST00000400540 UBE4BO95155 1302 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 TBC1D3BA6NDS4 549 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 HOXC11O43248 304 aaPredicted RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 BEST1O76090 585 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 CLSTN1O94985 981 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 STAU1O95793 577 aaKnown RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 CFIP05156 583 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 HOXB3P14651 431 aaPredicted RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 HOXB2P14652 356 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 RPL6Q02878 288 aaKnown RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 EHHADHQ08426 723 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 ANO4Q32M45 955 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 C10orf76Q5T2E6 689 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 PEAR1Q5VY43 1037 aaPredicted RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 EGFLAMQ63HQ2 1017 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 SLC23A3Q6PIS1 610 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 TERB1Q8NA31 727 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 OR2I1PQ8NGU4 316 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 OVCA2Q8WZ82 227 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 ACOX2Q99424 681 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 GTPBP2Q9BX10 602 aaKnown RBP12.64□□□□□ -0.39
LINC00544-201ENST00000400540 BLZF1Q9H2G9 400 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 SLC39A2Q9NP94 309 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 CD93Q9NPY3 652 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 SPHK2Q9NRA0 654 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 KRT82Q9NSB4 513 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 HMGXB4Q9UGU5 601 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 PLXNB3Q9ULL4 1909 aa12.64□□□□□ -0.39
LINC00544-201ENST00000400540 CKAP5Q14008 2032 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.63□□□□□ -0.39
LINC00544-201ENST00000400540 A0A1W2PQF6 199 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 SPTLC2O15270 562 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 PHACTR2O75167 634 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 AP1G2O75843 785 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 ZDHHC11BP0C7U3 371 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 CCDC130P13994 396 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 FAM193AP78312 1265 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 SNX30Q5VWJ9 437 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 BTBD8Q5XKL5 378 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 CNNM4Q6P4Q7 775 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 PIP4P1Q86T03 277 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 ACOT1Q86TX2 421 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
LINC00544-201ENST00000400540 OTUB2Q96DC9 234 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 SMARCD1Q96GM5 515 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 SMOQ99835 787 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 C7orf25Q9BPX7 421 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 LRRC27Q9C0I9 530 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 SLC6A17Q9H1V8 727 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
LINC00544-201ENST00000400540 IL37Q9NZH6 218 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 DEC1Q9P2X7 70 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
LINC00544-201ENST00000400540 KLK13Q9UKR3 277 aa12.63□□□□□ -0.39
LINC00544-201ENST00000400540 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms