RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 OTUB2Q96DC9 234 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 EPC1Q9H2F5 836 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 KIAA1468Q9P260 1216 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 TBC1D14Q9P2M4 693 aa15.7■□□□□ 0.1
SMIM11A-203ENST00000399299 CHURC1-FNTBB4DL54 471 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 K7ESF4 209 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 ATG13O75143 517 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 EGFP01133 1207 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 CYP17A1P05093 508 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 ACO1P21399 889 aaKnown RBP15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 ANP32AP39687 249 aaKnown RBP15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 PSEN1P49768 467 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 KLHDC10Q6PID8 442 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 CCDC186Q7Z3E2 898 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 TRIM59Q8IWR1 403 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 ADGRG2Q8IZP9 1017 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 ZNF276Q8N554 614 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 UBR7Q8N806 425 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 UBXN6Q9BZV1 441 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 FBRSL1Q9HCM7 1045 aaKnown RBP15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 USP3Q9Y6I4 520 aa15.69■□□□□ 0.1
SMIM11A-203ENST00000399299 CYP26A1O43174 497 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 RNF40O75150 1001 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 EIF2DP41214 584 aaKnown RBP15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 PGFP49763 221 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 SLC8A3P57103 927 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 CETN1Q12798 172 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 DHCR24Q15392 516 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 GAB4Q2WGN9 574 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 NAIF1Q69YI7 327 aaPredicted RBP15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 ANKRD52Q8NB46 1076 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 CCDC26Q8TAB7 109 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 RUBCNQ92622 972 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 JAKMIP2Q96AA8 810 aa15.68■□□□□ 0.1
SMIM11A-203ENST00000399299 ATG2BQ96BY7 2078 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 FGFR1OPO95684 399 aaKnown RBP15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 ADH1CP00326 375 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 CNR2P34972 360 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 ATP5C1P36542 298 aaKnown RBP15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 OPRD1P41143 372 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 STX17P56962 302 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 SGO2Q562F6 1265 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 PKN3Q6P5Z2 889 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 LONP2Q86WA8 852 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 LMO3Q8TAP4 145 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 EZH1Q92800 747 aaPredicted RBP15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 NT5C1BQ96P26 610 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 CDK5RAP1Q96SZ6 601 aaKnown RBP15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 NACA2Q9H009 215 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 C2orf42Q9NWW7 574 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 OSER1Q9NX31 292 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 KIAA1257Q9ULG3 409 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 SMG5Q9UPR3 1016 aaKnown RBP15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 SH3BP1Q9Y3L3 701 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 MYOFQ9NZM1 2061 aa15.67■□□□□ 0.1
SMIM11A-203ENST00000399299 CCDC163A0A0D9SF12 145 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 A0A1W2PQH9 124 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 BCAT1P54687 386 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 GOLGA8FQ08AF8 430 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 GOLGA8DPQ0D2H9 430 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 LRMPQ12912 555 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 CAMK4Q16566 473 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 RAB41Q5JT25 222 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 RHBDF2Q6PJF5 856 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 HTR3DQ70Z44 454 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 TADA2BQ86TJ2 420 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 TTC30AQ86WT1 665 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 KLF16Q9BXK1 252 aaPredicted RBP15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 SRRTQ9BXP5 876 aaKnown RBP15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 NMUR1Q9HB89 426 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 CLIC5Q9NZA1 410 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 RWDD2AQ9UIY3 292 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 TSPAN16Q9UKR8 245 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 DMXL1Q9Y485 3027 aa15.66■□□□□ 0.1
SMIM11A-203ENST00000399299 SCAMP3O14828 347 aaKnown RBP15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 XPO1O14980 1071 aaKnown RBP15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 AFPP02771 609 aaKnown RBP15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 PAEPP09466 180 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 CCDC192P0DO97 292 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 VDRP11473 427 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 ADH5P11766 374 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 RARGP13631 454 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 FNTBP49356 437 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 GCNT1Q02742 428 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 KCNH2Q12809 1159 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 CLEC17AQ6ZS10 378 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 SCD5Q86SK9 330 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 PIGZQ86VD9 579 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 WDR5BQ86VZ2 330 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 BBS7Q8IWZ6 715 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 ARHGAP18Q8N392 663 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 PPM1KQ8N3J5 372 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 CAMKK1Q8N5S9 505 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 ACDQ96AP0 544 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 HESX1Q9UBX0 185 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 DNMT3LQ9UJW3 386 aa15.65■□□□□ 0.1
SMIM11A-203ENST00000399299 NAGPAQ9UK23 515 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms