RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 KLC2Q9H0B6 622 aa13.64□□□□□ -0.23
PRAME-201ENST00000398741 ASCC2Q9H1I8 757 aaPredicted RBP13.64□□□□□ -0.23
PRAME-201ENST00000398741 DENND2DQ9H6A0 471 aaPredicted RBP13.64□□□□□ -0.23
PRAME-201ENST00000398741 HEY1Q9Y5J3 304 aa13.64□□□□□ -0.23
PRAME-201ENST00000398741 PPP2R3BQ9Y5P8 575 aa13.64□□□□□ -0.23
PRAME-201ENST00000398741 LOC285556D6RIA3 1793 aa13.64□□□□□ -0.23
PRAME-201ENST00000398741 C2CD4BA6NLJ0 364 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 TRIM49D1C9J1S8 452 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 E5RJQ4 531 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 GRAP2O75791 330 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 DESP17661 470 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 OSBPP22059 807 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 PHKA2P46019 1235 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 SERPINB4P48594 390 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 PDK2Q15119 407 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 ENDOVQ8N8Q3 282 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 SH3TC2Q8TF17 1288 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 ZBTB10Q96DT7 871 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 NAF1Q96HR8 494 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 SMARCAD1Q9H4L7 1026 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 PNPLA8Q9NP80 782 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 ARL8BQ9NVJ2 186 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 GPRC5DQ9NZD1 345 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 RNF181Q9P0P0 153 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 ZC3H7BQ9UGR2 993 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 BARX2Q9UMQ3 279 aaPredicted RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 NUMBLQ9Y6R0 609 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 I3L4J1 428 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 GYG2O15488 501 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 HBP1O60381 514 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 DNAJC6O75061 913 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 ENTPD5O75356 428 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 PGK2P07205 417 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 SNRPAP09012 282 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 MCF2P10911 925 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 TGM2P21980 687 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 GCLCP48506 637 aaPredicted RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 SLC26A2P50443 739 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 BCAR1P56945 870 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 IGBP1P78318 339 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 VGLL4Q14135 290 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 RAB6CQ53S08 254 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 TRIM68Q6AZZ1 485 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 PRPF39Q86UA1 669 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 MCUR1Q96AQ8 359 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 MIPEPQ99797 713 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 CADM1Q9BY67 442 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 RAB6CQ9H0N0 254 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 ASB7Q9H672 318 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 NGRNQ9NPE2 291 aaKnown RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
PRAME-201ENST00000398741 TSPAN16Q9UKR8 245 aa13.63□□□□□ -0.23
PRAME-201ENST00000398741 MYL2P10916 166 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 RBL1P28749 1068 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 NDST1P52848 882 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 BOLA3Q53S33 107 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 FAXCQ5TGI0 409 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 C4orf50Q6ZRC1 276 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 CYP4V2Q6ZWL3 525 aaPredicted RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 TRIM42Q8IWZ5 723 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 VPS52Q8N1B4 723 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 PLD5Q8N7P1 536 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 SKA1Q96BD8 255 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 DCLRE1BQ9H816 532 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 GPATCH2LQ9NWQ4 482 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 TTLL3Q9Y4R7 772 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 CSDE1O75534 798 aaKnown RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 FAM155BO75949 473 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 APRTP07741 180 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 DLDP09622 509 aaKnown RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 IQCF3P0C7M6 154 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 ESRRAP11474 423 aaPredicted RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 CDC25CP30307 473 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 RGS7P49802 495 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 TMEM132DQ14C87 1099 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 TSNAXIP1Q2TAA8 658 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 FAM182AQ5T1J6 154 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 TRNP1Q6NT89 227 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 SH2D5Q6ZV89 423 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 FBXO16Q8IX29 292 aaPredicted RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.62□□□□□ -0.234e-7■■■□□ 18
PRAME-201ENST00000398741 MICAL1Q8TDZ2 1067 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 PIWIL1Q96J94 861 aaKnown RBP13.62□□□□□ -0.23
PRAME-201ENST00000398741 PPP1R16BQ96T49 567 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 KCNK13Q9HB14 408 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 USP29Q9HBJ7 922 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 ETNK2Q9NVF9 386 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.62□□□□□ -0.233e-6■■■□□ 17.1
PRAME-201ENST00000398741 ZNF180Q9UJW8 692 aa13.62□□□□□ -0.23
PRAME-201ENST00000398741 TRDMT1O14717 391 aaKnown RBP13.61□□□□□ -0.23
PRAME-201ENST00000398741 KLF11O14901 512 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 LIN7AO14910 233 aaPredicted RBP13.61□□□□□ -0.23
PRAME-201ENST00000398741 USP2O75604 605 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms