RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 DSTYKQ6XUX3 929 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 KDELC2Q7Z4H8 507 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SLC26A11Q86WA9 606 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 WDTC1Q8N5D0 677 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 FAM13CQ8NE31 585 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SNRNP25Q9BV90 132 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 VTI1BQ9UEU0 232 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TSPAN16Q9UKR8 245 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ARID1BQ8NFD5 2236 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TIAM2Q8IVF5 1701 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CNTNAP2Q9UHC6 1331 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ASB14A6NK59 587 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ARIH2O95376 493 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 LSM8O95777 96 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SNX16P57768 344 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 PTP4A2Q12974 167 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TTLL4Q14679 1199 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 EML3Q32P44 896 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ZPBP2Q6X784 338 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 BBS12Q6ZW61 710 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ALYREFQ86V81 257 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 FAM131BQ86XD5 332 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 EXOC8Q8IYI6 725 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SIX6OS1Q8N1H7 587 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 DNAJC9Q8WXX5 260 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 USP6NLQ92738 828 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 HPDLQ96IR7 371 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 PPP1R36Q96LQ0 422 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CPXM1Q96SM3 734 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 DPEP3Q9H4B8 488 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CPSF3Q9UKF6 684 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 PACSIN3Q9UKS6 424 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MEI4A8MW99 385 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 GPR25O00155 361 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ACKR2O00590 384 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 NEMP1O14524 444 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 UNC5CO95185 931 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ASMTLO95671 621 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ATXN8OSP0DMR3 200 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CDK16Q00536 496 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ITKQ08881 620 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MXD4Q14582 209 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 KPNB1Q14974 876 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 DEFB106AQ8N104 65 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 DNAAF3Q8N9W5 541 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 VCPIP1Q96JH7 1222 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SRPK1Q96SB4 655 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF395Q9H8N7 513 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 HES2Q9Y543 173 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 UGT1A9O60656 530 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MOCS2O96007 188 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SPARCP09486 303 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ASPAP45381 313 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ATXN1P54253 815 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 OAZ1P54368 228 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CRADDP78560 199 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 VGLL4Q14135 290 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 C1orf146Q5VVC0 180 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 RFWD3Q6PCD5 774 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 RINLQ6ZS11 566 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SPATA24Q86W54 205 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CRLF3Q8IUI8 442 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 AFG1LQ8WV93 481 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MAGEB5Q9BZ81 275 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 UGT1A7Q9HAW7 530 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 UGT1A10Q9HAW8 530 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 UGT1A8Q9HAW9 530 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SENP1Q9P0U3 644 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MTO1Q9Y2Z2 717 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ROBO1Q9Y6N7 1651 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TTC36A6NLP5 189 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ENTPD5O75356 428 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 IL18RAPO95256 599 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ASS1P00966 412 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ADCYAP1R1P41586 468 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 AQP5P55064 265 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 RTP1P59025 263 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TFDP3Q5H9I0 405 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 POLNQ7Z5Q5 900 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 HACE1Q8IYU2 909 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 STKLD1Q8NE28 680 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 GCOM2Q9BZD3 368 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 VCXQ9H320 206 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 LRRC4Q9HBW1 653 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CYTH4Q9UIA0 394 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SHOC2Q9UQ13 582 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TIMM13Q9Y5L4 95 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 NFKBIEO00221 500 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SMIM24O75264 130 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 CYP2C8P10632 490 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 STIP1P31948 543 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 CDKN2BP42772 138 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 HSDL1Q3SXM5 330 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 KBTBD12Q3ZCT8 623 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 CELF3Q5SZQ8 465 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 SLC4A11Q8NBS3 891 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 PRR11Q96HE9 360 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 NAF1Q96HR8 494 aaKnown RBP5.11□□□□□ -1.59
SMAD4-202ENST00000398417 APOPT1Q96IL0 206 aa5.11□□□□□ -1.59
SMAD4-202ENST00000398417 NIFKQ9BYG3 293 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms