RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FAM227BQ96M60 508 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 RMDN3Q96TC7 470 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 PTDSS2Q9BVG9 487 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 TMEM120AQ9BXJ8 343 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 UNKLQ9H9P5 680 aaKnown RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 ZBTB26Q9HCK0 441 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 CASS4Q9NQ75 786 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 LUZP4Q9P127 313 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 ITGB1BP2Q9UKP3 347 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 CA14Q9ULX7 337 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 CDY1Q9Y6F8 540 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 MORC2Q9Y6X9 1032 aaPredicted RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 TRGV11A0A075B6L2 103 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 RASSF9O75901 435 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 NDST3O95803 873 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 HSD3B1P14060 373 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 CHKAP35790 457 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 PTDSS1P48651 473 aaKnown RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 PXNP49023 591 aaPredicted RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 FOXG1P55316 489 aaPredicted RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 RPS7P62081 194 aaKnown RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 FPGSQ05932 587 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 MYO1EQ12965 1108 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 TRIM14Q14142 442 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 TRIM71Q2Q1W2 868 aaKnown RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 SFRP4Q6FHJ7 346 aaPredicted RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 MRNIPQ6NTE8 343 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 MZT2AQ6P582 158 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 CCDC174Q6PII3 467 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 LDHAL6AQ6ZMR3 332 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 TECPR1Q7Z6L1 1165 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 ZNF280BQ86YH2 543 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 COLGALT2Q8IYK4 626 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 ADGRG5Q8IZF4 528 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 ACTRT2Q8TDY3 377 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 SSH3Q8TE77 659 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 RAPGEF4Q8WZA2 1011 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 RSC1A1Q92681 617 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 SMOC2Q9H3U7 446 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 HEYLQ9NQ87 328 aaPredicted RBP3.26□□□□□ -1.89
CD47-203ENST00000398258 TBCCD1Q9NVR7 557 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 ZSCAN32Q9NX65 697 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 IGSF9Q9P2J2 1179 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 SLC17A6Q9P2U8 582 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 VPS51Q9UID3 782 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 SSX2IPQ9Y2D8 614 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 DTNAQ9Y4J8 743 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 CEP83Q9Y592 693 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 DGKBQ9Y6T7 804 aa3.26□□□□□ -1.89
CD47-203ENST00000398258 AOX1Q06278 1338 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 CCDC189A1A4V9 331 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 LGALS16A8MUM7 142 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 H7C4K7 107 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 RAB27BO00194 218 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 PODXLO00592 558 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 DHHO43323 396 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 NTSR2O95665 410 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 GLP2RO95838 553 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 CSF1RP07333 972 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 ELFN1P0C7U0 828 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 IDEP14735 1019 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 ITGALP20701 1170 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 GATA3P23771 443 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 MST1P26927 711 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 CCT5P48643 541 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 LILRA4P59901 499 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 MRPS35P82673 323 aaKnown RBP3.25□□□□□ -1.89
CD47-203ENST00000398258 TIAL1Q01085 375 aaKnown RBP eCLIP3.25□□□□□ -1.89
CD47-203ENST00000398258 SATB1Q01826 763 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 EIF2B5Q13144 721 aaKnown RBP3.25□□□□□ -1.89
CD47-203ENST00000398258 SF3B3Q15393 1217 aaKnown RBP3.25□□□□□ -1.89
CD47-203ENST00000398258 ELF2Q15723 593 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 ETFDHQ16134 617 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 SRSF7Q16629 238 aaKnown RBP eCLIP3.25□□□□□ -1.89
CD47-203ENST00000398258 CCDC38Q502W7 563 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 HSP90AB4PQ58FF6 505 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 MANEALQ5VSG8 457 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 RRAGBQ5VZM2 374 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 CCDC28AQ8IWP9 274 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 SMAP1Q8IYB5 467 aaPredicted RBP3.25□□□□□ -1.89
CD47-203ENST00000398258 FAM9AQ8IZU1 332 aaPredicted RBP3.25□□□□□ -1.89
CD47-203ENST00000398258 CCDC150Q8NCX0 1101 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 SLC30A5Q8TAD4 765 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 STT3BQ8TCJ2 826 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 BPIFB1Q8TDL5 484 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 TRAPPC12Q8WVT3 735 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 SNX19Q92543 992 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 MUL1Q969V5 352 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 EVI5LQ96CN4 794 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 LRRC46Q96FV0 321 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 ZNF668Q96K58 619 aaPredicted RBP3.25□□□□□ -1.89
CD47-203ENST00000398258 FCRL4Q96PJ5 515 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 AIFM2Q9BRQ8 373 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 TTYH3Q9C0H2 523 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 MYLK2Q9H1R3 596 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 MAGEH1Q9H213 219 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 CXorf36Q9H7Y0 433 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 AS3MTQ9HBK9 375 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 OBP2BQ9NPH6 170 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms