RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 KCNIP3Q9Y2W7 256 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 NCF1BA6NI72 391 aaPredicted RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 NCF1CA8MVU1 366 aaPredicted RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 DDX39AO00148 427 aaKnown RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 PLOD2O00469 737 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 DNAJB6O75190 326 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 DARSP14868 501 aaKnown RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 ANKRD40Q6AI12 368 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 C14orf80Q86SX3 495 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 NOC2LQ9Y3T9 749 aaKnown RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 SLC34A1Q06495 639 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 PGBD2Q6P3X8 592 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 KIF18BQ86Y91 864 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF786Q8N393 782 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 POMGNT2Q8NAT1 580 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 TERB2Q8NHR7 220 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 ERLEC1Q96DZ1 483 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 PHF24Q9UPV7 400 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 IGFBP1P08833 259 aaPredicted RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 TALDO1P37837 337 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 GATMP50440 423 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 CHN2P52757 468 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 PRMT2P55345 433 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 MRPS10P82664 201 aaKnown RBP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 STXBP2Q15833 593 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 SNX30Q5VWJ9 437 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 C16orf59Q7L2K0 433 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 GALNT12Q8IXK2 581 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 COG1Q8WTW3 980 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 TBC1D22BQ9NU19 505 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 SMARCAL1Q9NZC9 954 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 XPR1Q9UBH6 696 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCBE1-201ENST00000398179 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
CCBE1-201ENST00000398179 IFI44LQ53G44 452 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 CACHD1Q5VU97 1274 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SNX20Q7Z614 316 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 RAD51AP1Q96B01 352 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 PPP3R2Q96LZ3 170 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 GANQ9H2C0 597 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 FANCLQ9NW38 375 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 GNG14A0A1W2PPG7 69 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 PDE2AO00408 941 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 JAK2O60674 1132 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SPAG6O75602 509 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 G0S2P27469 103 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 PKP1Q13835 747 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 CCDC137Q6PK04 289 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 CCNYL1Q8N7R7 359 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 ASCC1Q8N9N2 400 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 MTBPQ96DY7 904 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SAMD11Q96NU1 681 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 MAGEB6P1A0A0J9YX57 407 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 ITGA2BP08514 1039 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 MAGEA3P43357 314 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 CD97P48960 835 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 USP39Q53GS9 565 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 POC5Q8NA72 575 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SERTAD1Q9UHV2 236 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 PRG4Q92954 1404 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 PDS5AQ29RF7 1337 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 VSTM5A8MXK1 200 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 CCNT1O60563 726 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SPANXN2Q5MJ10 180 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 IZUMO2Q6UXV1 221 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SLC35F6Q8N357 371 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 OR5T2Q8NGG2 359 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 KBTBD7Q8WVZ9 684 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 RACGAP1Q9H0H5 632 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SARS2Q9NP81 518 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 LOC100506127A0A0U1RQW1 187 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 PSMD12O00232 456 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 IFNB1P01574 187 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 CKMP06732 381 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 HMBSP08397 361 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 ZBTB48P10074 688 aaPredicted RBP13.19□□□□□ -0.3
CCBE1-201ENST00000398179 CACNB3P54284 484 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 MSANTD1Q6ZTZ1 278 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 FAM228AQ86W67 206 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SLC43A2Q8N370 569 aa13.19□□□□□ -0.3
CCBE1-201ENST00000398179 SHC3Q92529 594 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms