RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 RBBP8NLQ8NC74 664 aaPredicted RBP17.6■□□□□ 0.41
APTR-201ENST00000398043 ENOX1Q8TC92 643 aaKnown RBP17.6■□□□□ 0.41
APTR-201ENST00000398043 WBP2Q969T9 261 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 FAM122AQ96E09 287 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 CHRDQ9H2X0 955 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 ECT2Q9H8V3 914 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 SMPD4Q9NXE4 827 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.6■□□□□ 0.41
APTR-201ENST00000398043 EML5Q05BV3 1969 aa17.6■□□□□ 0.41
APTR-201ENST00000398043 A0A1W2PQH9 124 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 NCAM2O15394 837 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 GREM1O60565 184 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 TLR5O60602 858 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 TBX18O95935 607 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 CD19P15391 556 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 MTIF2P46199 727 aaKnown RBP17.59■□□□□ 0.41
APTR-201ENST00000398043 PLA2G4AP47712 749 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 BST2Q10589 180 aaKnown RBP17.59■□□□□ 0.41
APTR-201ENST00000398043 CCINQ13939 588 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 CNGA2Q16280 664 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 TPD52L1Q16890 204 aaPredicted RBP17.59■□□□□ 0.41
APTR-201ENST00000398043 CDKAL1Q5VV42 579 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 KLHDC10Q6PID8 442 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 GBP6Q6ZN66 633 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 C11orf57Q6ZUT1 292 aaPredicted RBP17.59■□□□□ 0.41
APTR-201ENST00000398043 CREBRFQ8IUR6 639 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 C1orf210Q8IVY1 113 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 SLC35F5Q8WV83 523 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 TUBGCP2Q9BSJ2 902 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 KLF16Q9BXK1 252 aaPredicted RBP17.59■□□□□ 0.41
APTR-201ENST00000398043 IRF2BPLQ9H1B7 796 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 NDST4Q9H3R1 872 aa17.59■□□□□ 0.41
APTR-201ENST00000398043 UBE2TQ9NPD8 197 aaPredicted RBP17.59■□□□□ 0.41
APTR-201ENST00000398043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
APTR-201ENST00000398043 E2F8A0AVK6 867 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 BECN2A8MW95 431 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 TRDMT1O14717 391 aaKnown RBP17.58■□□□□ 0.4
APTR-201ENST00000398043 BRD2P25440 801 aaKnown RBP17.58■□□□□ 0.4
APTR-201ENST00000398043 GJA4P35212 333 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 IFNAR2P48551 515 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 GAS6Q14393 721 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 PON2Q15165 354 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 EXOC3L4Q17RC7 722 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 VWA3BQ502W6 1294 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 HSP90AA4PQ58FG1 418 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 TMEM196Q5HYL7 178 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 CCDC183Q5T5S1 534 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 DDX42Q86XP3 938 aaKnown RBP eCLIP17.58■□□□□ 0.4
APTR-201ENST00000398043 ADGRG2Q8IZP9 1017 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 UBA3Q8TBC4 463 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 KCTD13Q8WZ19 329 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 ATP2A3Q93084 1043 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 LMAN1LQ9HAT1 526 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 CLIC5Q9NZA1 410 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 CFAP97Q9P2B7 532 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 APEX2Q9UBZ4 518 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 AJAP1Q9UKB5 411 aaPredicted RBP17.58■□□□□ 0.4
APTR-201ENST00000398043 NFE2L3Q9Y4A8 694 aa17.58■□□□□ 0.4
APTR-201ENST00000398043 KCNJ18B7U540 433 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 SETSIPP0DME0 302 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 PSEN1P49768 467 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 TKTL1P51854 596 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 KCNMA1Q12791 1236 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 MTAPQ13126 283 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 KCNJ12Q14500 433 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 TCP11X2Q5H9J9 407 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 NAIF1Q69YI7 327 aaPredicted RBP17.57■□□□□ 0.4
APTR-201ENST00000398043 SMYD5Q6GMV2 418 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 FSTL4Q6MZW2 842 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 ENOSF1Q7L5Y1 443 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 SCML4Q8N228 414 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 CPA6Q8N4T0 437 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 SHC3Q92529 594 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 FBRSL1Q9HCM7 1045 aaKnown RBP17.57■□□□□ 0.4
APTR-201ENST00000398043 RBM12Q9NTZ6 932 aaKnown RBP17.57■□□□□ 0.4
APTR-201ENST00000398043 FAM86C1Q9NVL1 165 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 HESX1Q9UBX0 185 aa17.57■□□□□ 0.4
APTR-201ENST00000398043 CYP17A1P05093 508 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 RARGP13631 454 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 EEF1GP26641 437 aaKnown RBP17.56■□□□□ 0.4
APTR-201ENST00000398043 ATP5C1P36542 298 aaKnown RBP17.56■□□□□ 0.4
APTR-201ENST00000398043 NBL1P41271 181 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 RPL34P49207 117 aaKnown RBP17.56■□□□□ 0.4
APTR-201ENST00000398043 MFAP3P55082 362 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 STILQ15468 1287 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 PMF1Q6P1K2 205 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 TTC16Q8NEE8 873 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 EZH1Q92800 747 aaPredicted RBP17.56■□□□□ 0.4
APTR-201ENST00000398043 NELL1Q92832 810 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 FAM81BQ96LP2 452 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 IER2Q9BTL4 223 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 PRMT8Q9NR22 394 aaPredicted RBP17.56■□□□□ 0.4
APTR-201ENST00000398043 ANO10Q9NW15 660 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 NAGPAQ9UK23 515 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 NUDT5Q9UKK9 219 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 SPAG17Q6Q759 2223 aa17.56■□□□□ 0.4
APTR-201ENST00000398043 RIF1Q5UIP0 2472 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms