RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 HDXQ7Z353 690 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 LIMS2Q7Z4I7 341 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 DEFB128Q7Z7B8 93 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ITIH5Q86UX2 942 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BRSK2Q8IWQ3 736 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SCML4Q8N228 414 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TTC30BQ8N4P2 665 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 MRPL43Q8N983 215 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF557Q8N988 423 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TET1Q8NFU7 2136 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PPP1R35Q8TAP8 253 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 DIO2Q92813 273 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 WNT8BQ93098 351 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TBCBQ99426 244 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 UBXN6Q9BZV1 441 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TMEM60Q9H2L4 133 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ADAM7Q9H2U9 754 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 RETREG1Q9H6L5 497 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 AGO3Q9H9G7 860 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PNPLA8Q9NP80 782 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GDAP2Q9NXN4 497 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ADAM28Q9UKQ2 775 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TBX20Q9UMR3 447 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PCDHB6Q9Y5E3 794 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 A0A0B4J269 797 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BICDL2A1A5D9 508 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TBKBP1A7MCY6 615 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PI4K2BG5E9Z4 385 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TNFRSF10AO00220 468 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ABLIM1O14639 778 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BNIP3LO60238 219 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 HIP1RO75146 1068 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 OAZ2O95190 189 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GHRHP01286 108 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 F11P03951 625 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GALTP07902 379 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CPB1P15086 417 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ARF4P18085 180 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 LHX1P48742 406 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GFRA1P56159 465 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BCAR1P56945 870 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 DEFB103AP81534 67 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GSTM4Q03013 218 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 STIM1Q13586 685 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 LRRC32Q14392 662 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 STILQ15468 1287 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ZBTB6Q15916 424 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 HSF5Q4G112 596 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 NT5DC1Q5TFE4 455 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SLC8B1Q6J4K2 584 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 C16orf54Q6UWD8 224 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 RTN4RL1Q86UN2 441 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 MYOCDQ8IZQ8 938 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SMRP1Q8NCR6 262 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SMG8Q8ND04 991 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BAHD1Q8TBE0 780 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CCT6BQ92526 530 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ABHD17AQ96GS6 310 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PGBD1Q96JS3 809 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TEKT5Q96M29 485 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PHF7Q9BWX1 381 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 FAM49AQ9H0Q0 323 aaPredicted RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BHMT2Q9H2M3 363 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 NXF3Q9H4D5 531 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SUGCTQ9HAC7 445 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TBC1D13Q9NVG8 400 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 RRN3Q9NYV6 651 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.04□□□□□ -1.763e-9■□□□□ 10.5
UBE3A-202ENST00000397954 GDE1Q9NZC3 331 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TJP2Q9UDY2 1190 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TRAF3IP3Q9Y228 551 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GPR52Q9Y2T5 361 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 DDX39AO00148 427 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CLDN3O15551 220 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CHMP2AO43633 222 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TACC1O75410 805 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SMNDC1O75940 238 aaKnown RBP eCLIP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 RBP3P10745 1247 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 LIG4P49917 911 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 TUBP50607 506 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF445P59923 1031 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 PFKPQ01813 784 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ACAP2Q15057 778 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF174Q15697 407 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 KIZQ2M2Z5 673 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 EFHC2Q5JST6 749 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 CLLU1OSQ5K130 101 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 BROXQ5VW32 411 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SPATA1Q5VX52 437 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF720Q7Z2F6 126 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 C11orf74Q86VG3 221 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GPBP1Q86WP2 473 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 METTL23Q86XA0 190 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 THNSL1Q8IYQ7 743 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 DCP1BQ8IZD4 617 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 ELMOD1Q8N336 334 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 GUF1Q8N442 669 aaKnown RBP4.04□□□□□ -1.76
UBE3A-202ENST00000397954 SPPL2BQ8TCT7 592 aa4.04□□□□□ -1.76
UBE3A-202ENST00000397954 DEPDC1BQ8WUY9 529 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms