RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ITIH2P19823 946 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 ATP5C1P36542 298 aaKnown RBP8.61□□□□□ -1.03
PTPRD-204ENST00000397606 KPNA2P52292 529 aaKnown RBP8.61□□□□□ -1.03
PTPRD-204ENST00000397606 LPIN1Q14693 890 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 TMEM63BQ5T3F8 832 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 SLC39A4Q6P5W5 647 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 DNAAF5Q86Y56 855 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 COG1Q8WTW3 980 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 DEPDC1BQ8WUY9 529 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 TFB1MQ8WVM0 346 aaKnown RBP8.61□□□□□ -1.03
PTPRD-204ENST00000397606 WNT8BQ93098 351 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 RMDN1Q96DB5 314 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 DCLK3Q9C098 648 aa8.61□□□□□ -1.03
PTPRD-204ENST00000397606 PAPPA2Q9BXP8 1791 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ERICH4A6NGS2 130 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ACSL3O95573 720 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 HSPA1AP0DMV8 641 aaKnown RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 HSPA1BP0DMV9 641 aaKnown RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 CST5P28325 142 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 NUGGCQ68CJ6 796 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 SPOCD1Q6ZMY3 1216 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ANKRD42Q8N9B4 389 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ZSWIM2Q8NEG5 633 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 MYCBPAPQ8TBZ2 947 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 FOXP3Q9BZS1 431 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ABCB6Q9NP58 842 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 RBM12Q9NTZ6 932 aaKnown RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 STXBP5LQ9Y2K9 1186 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ESYT3A0FGR9 886 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 NCAM2O15394 837 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 CYP1A2P05177 515 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 APRTP07741 180 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ACRP10323 421 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 MAMLD1Q13495 774 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 LAMB3Q13751 1172 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 TIGD7Q6NT04 549 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 TMEM192Q8IY95 271 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ACTRT1Q8TDG2 376 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 KAT2BQ92831 832 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 SCYL1Q96KG9 808 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 LRRC1Q9BTT6 524 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 MARCH2Q9P0N8 246 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 TELO2Q9Y4R8 837 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 IQANK1A0A1B0GTG1 560 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 MBLAC1A4D2B0 266 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 O00370 1275 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 TTI1O43156 1089 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 TADA3O75528 432 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 KRT37O76014 449 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 NOL4O94818 638 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 GLUD1P00367 558 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 MT-ND3P03897 115 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 FAM163BP0C2L3 166 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 C1QTNF8P60827 252 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 MTFR1Q15390 333 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 HIF1AQ16665 826 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 INTS6LQ5JSJ4 861 aaKnown RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 HECTD3Q5T447 861 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 DDX53Q86TM3 631 aaKnown RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ATP11CQ8NB49 1132 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 DDI1Q8WTU0 396 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 SKA2Q8WVK7 121 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ISCUQ9H1K1 167 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ADAMTS10Q9H324 1103 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ASAH2Q9NR71 780 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 GPATCH2LQ9NWQ4 482 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 TAS2R14Q9NYV8 317 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 L1RE1Q9UN81 338 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 CDY1Q9Y6F8 540 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 BTNL10A8MVZ5 291 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 PITPNM1O00562 1244 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 GLI1P08151 1106 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 WARSP23381 471 aaKnown RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 GTF2F1P35269 517 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 COILP38432 576 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ZNF143P52747 638 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 AMPD2Q01433 879 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 ADCY2Q08462 1091 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 PDIA2Q13087 525 aaKnown RBP8.6□□□□□ -1.03
PTPRD-204ENST00000397606 KLHL38Q2WGJ6 581 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 CES5AQ6NT32 575 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 JAMLQ86YT9 394 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 CNPY4Q8N129 248 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 UCMAQ8WVF2 138 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 PDLIM7Q9NR12 457 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 INSL6Q9Y581 213 aa8.6□□□□□ -1.03
PTPRD-204ENST00000397606 CALCAP01258 141 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 OAS2P29728 719 aaKnown RBP8.59□□□□□ -1.03
PTPRD-204ENST00000397606 SETDB1Q15047 1291 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 E2F5Q15329 346 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 FAM183BPQ6ZVS7 135 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 FAM71BQ8TC56 605 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 USP33Q8TEY7 942 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 FRMD8Q9BZ67 464 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-204ENST00000397606 RNF39Q9H2S5 420 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
PTPRD-204ENST00000397606 TBC1D13Q9NVG8 400 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms