RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 KAT2BQ92831 832 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 WNK4Q96J92 1243 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 IDI2Q9BXS1 227 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 PAPOLBQ9NRJ5 636 aaKnown RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 SLC24A2Q9UI40 661 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 THSD7AQ9UPZ6 1657 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 SBF2Q86WG5 1849 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 TAF1LQ8IZX4 1826 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 YDJCA8MPS7 323 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 PGK2P07205 417 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ZBTB17Q13105 803 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ITGA9Q13797 1035 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 STILQ15468 1287 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 DEFB107AQ8IZN7 70 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ATXN2LQ8WWM7 1075 aaKnown RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 CNDP1Q96KN2 507 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 FOXO6A8MYZ6 492 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 SMAPO00193 183 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ENTPD5O75356 428 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 SUPT7LO94864 414 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 CXCL8P10145 99 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 RPA3P35244 121 aaPredicted RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 CHKAP35790 457 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ETFBP38117 255 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 GRIK1P39086 918 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 CACNA2D1P54289 1103 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 TCHHL1Q5QJ38 904 aaPredicted RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 C16orf89Q6UX73 402 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 C4orf19Q8IY42 314 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ETNPPLQ8TBG4 499 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 PCDH9Q9HC56 1237 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 AGO4Q9HCK5 861 aaKnown RBP11.13□□□□□ -0.63
CCDC40-204ENST00000397545 RNF19AQ9NV58 838 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 ADGRA2Q96PE1 1338 aa11.13□□□□□ -0.63
CCDC40-204ENST00000397545 BANF1O75531 89 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 RALBP11234 206 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 DRD4P21917 467 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 HNRNPH3P31942 346 aaKnown RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 PTPN7P35236 360 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 ABCG1P45844 678 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 MCL1Q07820 350 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 PDAP1Q13442 181 aaKnown RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SGO1Q5FBB7 561 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 DENND1BQ6P3S1 775 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 C1orf186Q6ZWK4 172 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 APOBEC3FQ8IUX4 373 aaKnown RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 NLGN2Q8NFZ4 835 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 USP13Q92995 863 aaPredicted RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 TTYH3Q9C0H2 523 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 PACSIN3Q9UKS6 424 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SNX13Q9Y5W8 968 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 PTPN11Q06124 597 aaPredicted RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 INPP5AQ14642 412 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 DCAF4L1Q3SXM0 396 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SPDYAQ5MJ70 313 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 EXOC3L1Q86VI1 746 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SCFD2Q8WU76 684 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 EML4Q9HC35 981 aaKnown RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 MYOZ2Q9NPC6 264 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 CASS4Q9NQ75 786 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 ASTN1O14525 1302 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SDR42E2A6NKP2 422 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 CES2O00748 559 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 FECHP22830 423 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 ZNF786Q8N393 782 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SHCBP1Q8NEM2 672 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 CNPY3Q9BT09 278 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 VPS33BQ9H267 617 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 PKD2L2Q9NZM6 624 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 KCNK1O00180 336 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 ZC3H11AO75152 810 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 JCHAINP01591 159 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 CPB1P15086 417 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 KPNB1Q14974 876 aaKnown RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 PAN2Q504Q3 1202 aaKnown RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 STYK1Q6J9G0 422 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 MKL1Q969V6 931 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
CCDC40-204ENST00000397545 ERVK-5Q9HDB9 667 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 KCNMB3Q9NPA1 279 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 SHOC2Q9UQ13 582 aa11.12□□□□□ -0.63
CCDC40-204ENST00000397545 GOLGA8TH3BQL2 631 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 GLRA3O75311 464 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 RPS6KA5O75582 802 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 IL18RAPO95256 599 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 VTNP04004 478 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 TPH1P17752 444 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 NAMPTP43490 491 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 HUNKP57058 714 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 ARSHQ5FYA8 562 aa11.11□□□□□ -0.63
CCDC40-204ENST00000397545 DUPD1Q68J44 220 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms