RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CNOT8Q9UFF9 292 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 PCDHA13Q9Y5I0 950 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 DOCK6Q96HP0 2047 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 NCANO14594 1321 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 UNC80Q8N2C7 3258 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 ATMINO43313 823 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 MYBL1P10243 752 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 GABRR2P28476 465 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 ITIH3Q06033 890 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 PABPC1LQ4VXU2 614 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 FAM102AQ5T9C2 384 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 CES5AQ6NT32 575 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 PDZD4Q76G19 769 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 BHLHA9Q7RTU4 235 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 MON1AQ86VX9 555 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 LEMD2Q8NC56 503 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 OVCA2Q8WZ82 227 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 MCRS1Q96EZ8 462 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 PIWIL1Q96J94 861 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 MSLNLQ96KJ4 702 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 GCNAQ96QF7 691 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 THAP2Q9H0W7 228 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 S1PR5Q9H228 398 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 ADAM7Q9H2U9 754 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 IL21Q9HBE4 155 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 TLR8Q9NR97 1041 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 TRPM5Q9NZQ8 1165 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 MYO1AQ9UBC5 1043 aa24.77■■□□□ 1.56
TSPAN4-203ENST00000397397 A0A1W2PQH9 124 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 YJEFN3A6XGL0 299 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 E7ENQ6 273 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 FGF19O95750 216 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 ABL1P00519 1130 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 F11P03951 625 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 EPHA5P54756 1037 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 GSCP56915 257 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 YWHAGP61981 247 aaKnown RBP eCLIP24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 GPC5P78333 572 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 KRT83P78385 493 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 CLUL1Q15846 466 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 EFHC1Q5JVL4 640 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 DNAJC24Q6P3W2 148 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 SCD5Q86SK9 330 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 ARHGAP18Q8N392 663 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 CTNNBL1Q8WYA6 563 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 GOLGA1Q92805 767 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 FAM149B1Q96BN6 582 aa24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 REXO2Q9Y3B8 237 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-203ENST00000397397 LTFP02788 710 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 CDC25CP30307 473 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 PPP3CCP48454 512 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 PGFP49763 221 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 TAF5Q15542 800 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 HFE2Q6ZVN8 426 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 GAREM2Q75VX8 874 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 C3orf20Q8ND61 904 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 SELENOOQ9BVL4 669 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 UBE2ZQ9H832 354 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 NMUR1Q9HB89 426 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 CD207Q9UJ71 328 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 CDH22Q9UJ99 828 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 INTUQ9ULD6 942 aa24.75■■□□□ 1.55
TSPAN4-203ENST00000397397 NOTCH4Q99466 2003 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 SPTBN5Q9NRC6 3674 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 TADA3O75528 432 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 GRAP2O75791 330 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 TMEM253P0C7T8 217 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 ZDHHC11BP0C7U3 371 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 SCNN1AP37088 669 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 PSEN1P49768 467 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 ATAT1Q5SQI0 421 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 BTBD8Q5XKL5 378 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 SLC26A9Q7LBE3 791 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 TMEM150AQ86TG1 271 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 ARHGEF26Q96DR7 871 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 TCEAL4Q96EI5 215 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 ATXN3LQ9H3M9 355 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 METTL5Q9NRN9 209 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 PARVAQ9NVD7 372 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 ASNSD1Q9NWL6 643 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 OBSL1O75147 1896 aa24.74■■□□□ 1.55
TSPAN4-203ENST00000397397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 A0A1W2PRU2 124 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 ZNF840PA6NDX5 716 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 H3BQ06 376 aaPredicted RBP24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 ZNF197O14709 1029 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 HSF2BPO75031 334 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 GJB6O95452 261 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 GLI1P08151 1106 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 GJA1P17302 382 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 CCR2P41597 374 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 RNASE9P60153 205 aaKnown RBP24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 BSPRYQ5W0U4 402 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 PLEKHA7Q6IQ23 1121 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 KIAA1328Q86T90 577 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 SHKBP1Q8TBC3 707 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 RIPOR3Q96MK2 946 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 AVENQ9NQS1 362 aaPredicted RBP24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 OSER1Q9NX31 292 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 THEGQ9P2T0 379 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms