RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CRTAC1Q9NQ79 661 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 TBC1D14Q9P2M4 693 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 MORC2Q9Y6X9 1032 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-208ENST00000397204 E2F8A0AVK6 867 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 TMEM8BA6NDV4 472 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 C1QTNF9BB2RNN3 333 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 KAT7O95251 611 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 KLF8O95600 359 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 OLFM2O95897 454 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 ADH1CP00326 375 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 CST3P01034 146 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 AVPP01185 164 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 APODP05090 189 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 CYP17A1P05093 508 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 C1QTNF9P0C862 333 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 PTPN1P18031 435 aaKnown RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 BCKDHBP21953 392 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 P2RY2P41231 377 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 SLC6A11P48066 632 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 PSMC1P62191 440 aaKnown RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 TAF10Q12962 218 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 PREPLQ4J6C6 727 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 LMBRD2Q68DH5 695 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 TRAPPC11Q7Z392 1133 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 SYT12Q8IV01 421 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 WDR49Q8IV35 697 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 ALLCQ8N6M5 410 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 IL17RCQ8NAC3 791 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 TXNDC5Q8NBS9 432 aaKnown RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 MDGA1Q8NFP4 955 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 WHAMMQ8TF30 809 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 OTUB2Q96DC9 234 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 PCED1BQ96HM7 432 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 FAM84AQ96KN4 292 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 SPACA7Q96KW9 195 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 CLIC6Q96NY7 704 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 PANK2Q9BZ23 570 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 SNX25Q9H3E2 840 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 SLC32A1Q9H598 525 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 UPF2Q9HAU5 1272 aaKnown RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 CPQQ9Y646 472 aa9.32□□□□□ -0.92
CAPN3-208ENST00000397204 KIF26AQ9ULI4 1882 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 ZNF638Q14966 1978 aaKnown RBP9.32□□□□□ -0.92
CAPN3-208ENST00000397204 ASCC3Q8N3C0 2202 aaKnown RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 VPS37CA5D8V6 355 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 UPK3BL1B0FP48 263 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 PATE3B3GLJ2 98 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 UPK3BL2E5RIL1 263 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 F8VP50 259 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 SGK1O00141 431 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 ABL1P00519 1130 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 OAS1P00973 400 aaKnown RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 VARSP26640 1264 aaKnown RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 YWHAQP27348 245 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 HOXD12P35452 270 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 STAT6P42226 847 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 KIR2DL1P43626 348 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 SNRPFP62306 86 aaKnown RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 AMPD3Q01432 767 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 GAD2Q05329 585 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 RESTQ13127 1097 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 CUL4AQ13619 759 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 SLC39A14Q15043 492 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 AGERQ15109 404 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 UAP1L1Q3KQV9 507 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 TRIM61Q5EBN2 209 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 MDH1BQ5I0G3 518 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 EMC10Q5UCC4 262 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 SLC23A3Q6PIS1 610 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 HS2ST1Q7LGA3 356 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 TTC30AQ86WT1 665 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 CBWD2Q8IUF1 395 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 NUP93Q8N1F7 819 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 ARMC2Q8NEN0 867 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 PDZD8Q8NEN9 1154 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 OR6B3Q8NGW1 331 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 CEP76Q8TAP6 659 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 ZNF507Q8TCN5 953 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 OVCA2Q8WZ82 227 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 HPS1Q92902 700 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 FNBP1Q96RU3 617 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 DUSP9Q99956 384 aaKnown RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 MRPL45Q9BRJ2 306 aaKnown RBP9.31□□□□□ -0.92
CAPN3-208ENST00000397204 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 ARHGEF4Q9NR80 690 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 SMPD4Q9NXE4 827 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 HSPBP1Q9NZL4 362 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 CFAP97Q9P2B7 532 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 ZMIZ1Q9ULJ6 1067 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 FREM2Q5SZK8 3169 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 DENND4CQ5VZ89 1909 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 PTPRJQ12913 1337 aa9.31□□□□□ -0.92
CAPN3-208ENST00000397204 ANK1P16157 1881 aa9.3□□□□□ -0.92
CAPN3-208ENST00000397204 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.3□□□□□ -0.92
CAPN3-208ENST00000397204 TBC1D3BA6NDS4 549 aa9.3□□□□□ -0.92
CAPN3-208ENST00000397204 ANTXRLA6NF34 631 aa9.3□□□□□ -0.92
CAPN3-208ENST00000397204 ADAM23O75077 832 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms