RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 COCHO43405 550 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 CBFA2T3O75081 653 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 NDUFS2O75306 463 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 GCNT3O95395 438 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 TNNC2P02585 160 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 YWHAQP27348 245 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 CACNA2D1P54289 1103 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 IFRD2Q12894 506 aaPredicted RBP15.91■□□□□ 0.14
SEC13-206ENST00000397102 GRIK2Q13002 908 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 ANO4Q32M45 955 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 WDR45BQ5MNZ6 344 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 EGFLAMQ63HQ2 1017 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 SDE2Q6IQ49 451 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 HS2ST1Q7LGA3 356 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 BBS7Q8IWZ6 715 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 CHPFQ8IZ52 775 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 SYCP3Q8IZU3 236 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 GPD1LQ8N335 351 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 OR5B17Q8NGF7 314 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 NOC3LQ8WTT2 800 aaKnown RBP15.91■□□□□ 0.14
SEC13-206ENST00000397102 COL26A1Q96A83 441 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 MMS19Q96T76 1030 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 GABRG3Q99928 467 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 ELOVL4Q9GZR5 314 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 PCIF1Q9H4Z3 704 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 TMEM30AQ9NV96 361 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 TBC1D7Q9P0N9 293 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 KIAA1522Q9P206 1035 aaPredicted RBP15.91■□□□□ 0.14
SEC13-206ENST00000397102 DKK4Q9UBT3 224 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 PCOLCE2Q9UKZ9 415 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 RAXQ9Y2V3 346 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 PCDHB13Q9Y5F0 798 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 APC2O95996 2303 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 PTPRJQ12913 1337 aa15.91■□□□□ 0.14
SEC13-206ENST00000397102 SMG1Q96Q15 3661 aaKnown RBP15.9■□□□□ 0.14
SEC13-206ENST00000397102 EIF4E1BA6NMX2 242 aaKnown RBP15.9■□□□□ 0.14
SEC13-206ENST00000397102 H3BQV1 296 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 RTN3O95197 1032 aaPredicted RBP15.9■□□□□ 0.14
SEC13-206ENST00000397102 GNL1P36915 607 aaPredicted RBP15.9■□□□□ 0.14
SEC13-206ENST00000397102 CASP5P51878 434 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 ALCAMQ13740 583 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 HECTD3Q5T447 861 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 GRAMD4Q6IC98 578 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 SLCO6A1Q86UG4 719 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 TMEM25Q86YD3 366 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 NUP93Q8N1F7 819 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 FBXO32Q969P5 355 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 ACOX2Q99424 681 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 MRPL45Q9BRJ2 306 aaKnown RBP15.9■□□□□ 0.14
SEC13-206ENST00000397102 SNX25Q9H3E2 840 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 OLFML3Q9NRN5 406 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 STK17AQ9UEE5 414 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 NME7Q9Y5B8 376 aa15.9■□□□□ 0.14
SEC13-206ENST00000397102 KIAA0391O15091 583 aaKnown RBP15.89■□□□□ 0.13
SEC13-206ENST00000397102 TRIM24O15164 1050 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 TACC1O75410 805 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 FAM163BP0C2L3 166 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 PTPN1P18031 435 aaKnown RBP15.89■□□□□ 0.13
SEC13-206ENST00000397102 TUBP50607 506 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 SURF1Q15526 300 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 DUOXA2Q1HG44 320 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 SNX30Q5VWJ9 437 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 TMPRSS7Q7RTY8 843 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 SPRYD3Q8NCJ5 442 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 OR6B3Q8NGW1 331 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 DNAJC19Q96DA6 116 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 LRIG1Q96JA1 1093 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 MRGPRX1Q96LB2 322 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 ZNF518BQ9C0D4 1074 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 CD93Q9NPY3 652 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 DNAJC17Q9NVM6 304 aaKnown RBP15.89■□□□□ 0.13
SEC13-206ENST00000397102 NFE2L3Q9Y4A8 694 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 LOC400499M0QZD8 3231 aa15.89■□□□□ 0.13
SEC13-206ENST00000397102 A0A1B0GTW7 788 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 CACNG3O60359 315 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 ZNF883P0CG24 379 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 MAOBP27338 520 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 GLIS3Q8NEA6 775 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 SCFD1Q8WVM8 642 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 DNASE2BQ8WZ79 361 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 XPO6Q96QU8 1125 aaKnown RBP15.88■□□□□ 0.13
SEC13-206ENST00000397102 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 RAD54BQ9Y620 910 aa15.88■□□□□ 0.13
SEC13-206ENST00000397102 ZNF233A6NK53 670 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 MEI4A8MW99 385 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 GFRA2O00451 464 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 CLDN5O00501 218 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
SEC13-206ENST00000397102 CD6P30203 668 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 KIAA1324Q6UXG2 1013 aaKnown RBP15.87■□□□□ 0.13
SEC13-206ENST00000397102 WDR49Q8IV35 697 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 BAHD1Q8TBE0 780 aaPredicted RBP15.87■□□□□ 0.13
SEC13-206ENST00000397102 SETD7Q8WTS6 366 aaKnown RBP15.87■□□□□ 0.13
SEC13-206ENST00000397102 WBP2Q969T9 261 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 ERLEC1Q96DZ1 483 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 EPSTI1Q96J88 318 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 KIF2CQ99661 725 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 B3GNT5Q9BYG0 378 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 FGFBP2Q9BYJ0 223 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 SLC6A17Q9H1V8 727 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms