RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ELMO3Q96BJ8 720 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 GBP4Q96PP9 640 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 P2RY13Q9BPV8 354 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 RNF38Q9H0F5 515 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 CYLDQ9NQC7 956 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 RBM12Q9NTZ6 932 aaKnown RBP14.71□□□□□ -0.05
SEC13-204ENST00000397099 CLIC5Q9NZA1 410 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 HESX1Q9UBX0 185 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 CHORDC1Q9UHD1 332 aaPredicted RBP14.71□□□□□ -0.05
SEC13-204ENST00000397099 FAM186AA6NE01 2351 aa14.71□□□□□ -0.05
SEC13-204ENST00000397099 GOLGA6L22H0YM25 854 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 COCHO43405 550 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 TLR5O60602 858 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 BEST1O76090 585 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 ADH1CP00326 375 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 PAEPP09466 180 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 VDRP11473 427 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 ACO1P21399 889 aaKnown RBP14.7□□□□□ -0.06
SEC13-204ENST00000397099 CNR2P34972 360 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 ATP5C1P36542 298 aaKnown RBP14.7□□□□□ -0.06
SEC13-204ENST00000397099 ID4P47928 161 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 KIF11P52732 1056 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 BCAT1P54687 386 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 KCNH2Q12809 1159 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 CAMK4Q16566 473 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 ZNF394Q53GI3 561 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 SGO2Q562F6 1265 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 SUMF1Q8NBK3 374 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 CD101Q93033 1021 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
SEC13-204ENST00000397099 SRRTQ9BXP5 876 aaKnown RBP14.7□□□□□ -0.06
SEC13-204ENST00000397099 CLSTN2Q9H4D0 955 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 GMIPQ9P107 970 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 SH3BP1Q9Y3L3 701 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 WNT6Q9Y6F9 365 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 USP3Q9Y6I4 520 aa14.7□□□□□ -0.06
SEC13-204ENST00000397099 PTPRZ1P23471 2315 aaPredicted RBP14.69□□□□□ -0.06
SEC13-204ENST00000397099 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.69□□□□□ -0.06
SEC13-204ENST00000397099 CHURC1-FNTBB4DL54 471 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 HHLA1C9JL84 531 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 SETSIPP0DME0 302 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 RALAP11233 206 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 ARSAP15289 507 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 NUDT18Q6ZVK8 323 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 ENOSF1Q7L5Y1 443 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 FAM114A1Q8IWE2 563 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 ADGRG2Q8IZP9 1017 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 PPM1KQ8N3J5 372 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 DCLK2Q8N568 766 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 RIN3Q8TB24 985 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 ARID3AQ99856 593 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 CFAP97Q9P2B7 532 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 DNMT3LQ9UJW3 386 aa14.69□□□□□ -0.06
SEC13-204ENST00000397099 LSM7Q9UK45 103 aaKnown RBP14.69□□□□□ -0.06
SEC13-204ENST00000397099 SMG5Q9UPR3 1016 aaKnown RBP14.69□□□□□ -0.06
SEC13-204ENST00000397099 CCDC163A0A0D9SF12 145 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 OTOL1A6NHN0 477 aaPredicted RBP14.68□□□□□ -0.06
SEC13-204ENST00000397099 XPO1O14980 1071 aaKnown RBP14.68□□□□□ -0.06
SEC13-204ENST00000397099 ERCC5P28715 1186 aaPredicted RBP14.68□□□□□ -0.06
SEC13-204ENST00000397099 PLA2G4AP47712 749 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 GALK1P51570 392 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 STX17P56962 302 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 ZXDBP98169 803 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 SATB1Q01826 763 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 BST2Q10589 180 aaKnown RBP14.68□□□□□ -0.06
SEC13-204ENST00000397099 TPD52L1Q16890 204 aaPredicted RBP14.68□□□□□ -0.06
SEC13-204ENST00000397099 EHBP1Q8NDI1 1231 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 ACDQ96AP0 544 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 NUP62CLQ9H1M0 184 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 CCSER2Q9H7U1 834 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.68□□□□□ -0.06
SEC13-204ENST00000397099 SMPD4Q9NXE4 827 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 RAB23Q9ULC3 237 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 ZNF510Q9Y2H8 683 aa14.68□□□□□ -0.06
SEC13-204ENST00000397099 GTPBP10A4D1E9 387 aaKnown RBP14.67□□□□□ -0.06
SEC13-204ENST00000397099 CYP26A1O43174 497 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 LILRB5O75023 590 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 RARGP13631 454 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 CD19P15391 556 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 COG7P83436 770 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 GAD2Q05329 585 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 DHCR24Q15392 516 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 RAB41Q5JT25 222 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 BTBD8Q5XKL5 378 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 FSTL4Q6MZW2 842 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 TMEM270Q6UE05 265 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 LCLAT1Q6UWP7 414 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 Q6ZS52 159 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 HTR3DQ70Z44 454 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 CAMKK1Q8N5S9 505 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 UBR7Q8N806 425 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 LMO3Q8TAP4 145 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 ZFRQ96KR1 1074 aaKnown RBP14.67□□□□□ -0.06
SEC13-204ENST00000397099 EPC1Q9H2F5 836 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 LINC00597Q9H2U6 94 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 OLA1Q9NTK5 396 aaKnown RBP14.67□□□□□ -0.06
SEC13-204ENST00000397099 NAGPAQ9UK23 515 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 TSPAN16Q9UKR8 245 aa14.67□□□□□ -0.06
SEC13-204ENST00000397099 GVINP1Q7Z2Y8 2422 aa14.66□□□□□ -0.06
SEC13-204ENST00000397099 ZBED1O96006 694 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms