RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 NPY6RQ99463 290 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 STAP1Q9ULZ2 295 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 PTPRDP23468 1912 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 PTPRSQ13332 1948 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 LINC01553A4QN01 128 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 YJEFN3A6XGL0 299 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 EFCAB8A8MWE9 144 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 E7ENQ6 273 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 PDE2AO00408 941 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-209ENST00000397036 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
MCF2L-209ENST00000397036 CEP104O60308 925 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 ZRANB2O95218 330 aaKnown RBP eCLIP14.23□□□□□ -0.13
MCF2L-209ENST00000397036 FYNP06241 537 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 USP17L7P0C7H9 530 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 MIPP30301 263 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 SLC25A11Q02978 314 aaKnown RBP14.23□□□□□ -0.13
MCF2L-209ENST00000397036 DUSP4Q13115 394 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 CCDC181Q5TID7 509 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 VSIG1Q86XK7 387 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 PSTKQ8IV42 348 aaKnown RBP14.23□□□□□ -0.13
MCF2L-209ENST00000397036 SCN4BQ8IWT1 228 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 DEFB106AQ8N104 65 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 TEKT4Q8WW24 435 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 GOLGA1Q92805 767 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 FAM149B1Q96BN6 582 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 PSMB7Q99436 277 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 TTLL2Q9BWV7 592 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 EHD2Q9NZN4 543 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 USTQ9Y2C2 406 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 EFR3BQ9Y2G0 817 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 PCDHA11Q9Y5I1 949 aa14.23□□□□□ -0.13
MCF2L-209ENST00000397036 NLRC5Q86WI3 1866 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 CEP290O15078 2479 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 LCHNA4D1U4 455 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 PGRMC1O00264 195 aaKnown RBP14.22□□□□□ -0.13
MCF2L-209ENST00000397036 TADA3O75528 432 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 GRAP2O75791 330 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 TRUB2O95900 331 aaKnown RBP14.22□□□□□ -0.13
MCF2L-209ENST00000397036 F9P00740 461 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 PYGMP11217 842 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 PTPN7P35236 360 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 CETN2P41208 172 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 MARCKSL1P49006 195 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 PSEN1P49768 467 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 ARPP19P56211 112 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 SHHQ15465 462 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 DDR2Q16832 855 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 C9orf50Q5SZB4 431 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 BSPRYQ5W0U4 402 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 DENND5BQ6ZUT9 1274 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 RTL10Q7L3V2 364 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 TCEAL8Q8IYN2 117 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 ZNF276Q8N554 614 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 SPPL3Q8TCT6 385 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 RBM41Q96IZ5 413 aaKnown RBP14.22□□□□□ -0.13
MCF2L-209ENST00000397036 RNPC3Q96LT9 517 aaKnown RBP14.22□□□□□ -0.13
MCF2L-209ENST00000397036 CFAP57Q96MR6 1250 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 PGLYRP2Q96PD5 576 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 CRISPLD1Q9H336 500 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 NGRNQ9NPE2 291 aaKnown RBP14.22□□□□□ -0.13
MCF2L-209ENST00000397036 ABCC13Q9NSE7 274 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 USP18Q9UMW8 372 aa14.22□□□□□ -0.13
MCF2L-209ENST00000397036 FSCN2O14926 492 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 MDM4O15151 490 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 RPL17P18621 184 aaKnown RBP14.21□□□□□ -0.13
MCF2L-209ENST00000397036 YWHAQP27348 245 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 AIF1P55008 147 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 HDAC4P56524 1084 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 PPP2R5EQ16537 467 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 TAZQ16635 292 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 PTPROQ16827 1216 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 MGAT5BQ3V5L5 792 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 DCAF6Q58WW2 860 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 SEL1L2Q5TEA6 688 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 PDE12Q6L8Q7 609 aaKnown RBP14.21□□□□□ -0.13
MCF2L-209ENST00000397036 RSRC2Q7L4I2 434 aaKnown RBP14.21□□□□□ -0.13
MCF2L-209ENST00000397036 SPATA4Q8NEY3 305 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 FAM172AQ8WUF8 416 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 MAIP1Q8WWC4 291 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 OVCA2Q8WZ82 227 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 MS4A14Q96JA4 679 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 CAPZA3Q96KX2 299 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 GDF15Q99988 308 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 CLIC5Q9NZA1 410 aa14.21□□□□□ -0.13
MCF2L-209ENST00000397036 ZNF487B1APH4 448 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 CCDC188H7C350 402 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 C2CD2LO14523 706 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 TEX28O15482 410 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 PRPSAP2O60256 369 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 CXCL14O95715 111 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 IL1R2P27930 398 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 CTNNB1P35222 781 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 DNA2P51530 1060 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 RABGGTBP53611 331 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 ERVK-21P61565 698 aa14.2□□□□□ -0.14
MCF2L-209ENST00000397036 EIF4EBP2Q13542 120 aaPredicted RBP14.2□□□□□ -0.14
MCF2L-209ENST00000397036 C15orf59Q2T9L4 293 aaPredicted RBP14.2□□□□□ -0.14
MCF2L-209ENST00000397036 LILRA6Q6PI73 481 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms