RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 STILQ15468 1287 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 EML3Q32P44 896 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 TMEM196Q5HYL7 178 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 MAML2Q8IZL2 1156 aaPredicted RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 ADGRG2Q8IZP9 1017 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 SPEM1Q8N4L4 309 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 UBR7Q8N806 425 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 RIN3Q8TB24 985 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 NELL1Q92832 810 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 CDK5RAP1Q96SZ6 601 aaKnown RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 ARID3AQ99856 593 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 EBF3Q9H4W6 596 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 ECT2Q9H8V3 914 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 LMBRD1Q9NUN5 540 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 SPATA6Q9NWH7 488 aaPredicted RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 CLIC5Q9NZA1 410 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 NDRG2Q9UN36 371 aaKnown RBP11.71□□□□□ -0.53
NDUFA9-202ENST00000396655 PATJQ8NI35 1801 aa11.71□□□□□ -0.54
NDUFA9-202ENST00000396655 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 OTOL1A6NHN0 477 aaPredicted RBP11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 COCHO43405 550 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 TLR5O60602 858 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 ABL1P00519 1130 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 SP9P0CG40 484 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 VDRP11473 427 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 ACO1P21399 889 aaKnown RBP11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 DRD1P21728 446 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 ADORA2BP29275 332 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 HOXA6P31267 233 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 CCR3P51677 355 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 STX17P56962 302 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 GRSF1Q12849 480 aaKnown RBP eCLIP11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 MTAPQ13126 283 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 RAB41Q5JT25 222 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 TXNDC11Q6PKC3 985 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 ENOSF1Q7L5Y1 443 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 TADA2BQ86TJ2 420 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 ARHGAP18Q8N392 663 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 IPO9Q96P70 1041 aaKnown RBP11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 MED15Q96RN5 788 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 PRMT8Q9NR22 394 aaPredicted RBP11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 CNTN6Q9UQ52 1028 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 PCDHGA2Q9Y5H1 932 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 CPQQ9Y646 472 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 NCOR2Q9Y618 2525 aa11.7□□□□□ -0.54
NDUFA9-202ENST00000396655 GOLGA6L22H0YM25 854 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 ATG13O75143 517 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 MBL2P11226 248 aaPredicted RBP11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 GJA4P35212 333 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 ATP5C1P36542 298 aaKnown RBP11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 EIF2DP41214 584 aaKnown RBP11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 CXCL12P48061 93 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 SOX9P48436 509 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 BCAT1P54687 386 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 IFRD2Q12894 506 aaPredicted RBP11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 CNGA2Q16280 664 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 MEA1Q16626 185 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 TRIM68Q6AZZ1 485 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 PM20D1Q6GTS8 502 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 LCLAT1Q6UWP7 414 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 HTR3DQ70Z44 454 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 FAM114A1Q8IWE2 563 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 SCML4Q8N228 414 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 ZBTB44Q8NCP5 570 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 NKD2Q969F2 451 aaPredicted RBP11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 CHFRQ96EP1 664 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 ZFRQ96KR1 1074 aaKnown RBP11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 LINC00597Q9H2U6 94 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 THAP9Q9H5L6 903 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 GMIPQ9P107 970 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 HESX1Q9UBX0 185 aa11.69□□□□□ -0.54
NDUFA9-202ENST00000396655 COL4A3Q01955 1670 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 CHURC1-FNTBB4DL54 471 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 O00370 1275 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 SETSIPP0DME0 302 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 ARSAP15289 507 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 PLA2G4AP47712 749 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 GOLGA8FQ08AF8 430 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 GOLGA8DPQ0D2H9 430 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 BST2Q10589 180 aaKnown RBP11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 PON2Q15165 354 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 TMEM270Q6UE05 265 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 RBM43Q6ZSC3 357 aaKnown RBP11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 GPRIN1Q7Z2K8 1008 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 PIGZQ86VD9 579 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 PPM1KQ8N3J5 372 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 KCTD13Q8WZ19 329 aa11.68□□□□□ -0.54
NDUFA9-202ENST00000396655 CNOT6LQ96LI5 555 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms