RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 REXO1Q8N1G1 1221 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 STARD8Q92502 1023 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ERGIC2Q96RQ1 377 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 OSBPL6Q9BZF3 934 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 CCDC134Q9H6E4 229 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 RIOX1Q9H6W3 641 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SIAEQ9HAT2 523 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 GINM1Q9NU53 330 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 GREB1LQ9C091 1923 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 MROH7Q68CQ1 1323 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 LRRC37AA6NMS7 1700 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 FUOMA2VDF0 154 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 GOLGA8OA6NCC3 632 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 GOLGA8NF8WBI6 632 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 H3BUI4 141 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 M0R3G1 203 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 COL6A2P12110 1019 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 UQCRBP14927 111 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 AKR1B1P15121 316 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 VARSP26640 1264 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 ART3Q13508 389 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 MTFR1Q15390 333 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 TAF5Q15542 800 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 WDR72Q3MJ13 1102 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 MFSD14BQ5SR56 506 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 NUP93Q8N1F7 819 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ATXN2LQ8WWM7 1075 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 BORCS5Q969J3 196 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ZNF317Q96PQ6 595 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 CALN1Q9BXU9 219 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ZNF717Q9BY31 904 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 COPS7BQ9H9Q2 264 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 CHKBQ9Y259 395 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 FCHO1O14526 889 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 WFS1O76024 890 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 APOA1P02647 267 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 BNIP3Q12983 259 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 NME3Q13232 169 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 AUHQ13825 339 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 MAN2A1Q16706 1144 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 BBS9Q3SYG4 887 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ZNF662Q6ZS27 426 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 LRRC55Q6ZSA7 311 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 NECAB2Q7Z6G3 386 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ZFRQ96KR1 1074 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 ZSCAN5AQ9BUG6 496 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 CDC42EP4Q9H3Q1 356 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 EPS8L2Q9H6S3 715 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 EHMT1Q9H9B1 1298 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 DDX4Q9NQI0 724 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 EPS15L1Q9UBC2 864 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 CCL15-CCL14A0A0B4J2E2 113 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A9O60656 530 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 GUCY1B2O75343 617 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 INHBAP08476 426 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 POLR2MP0CAP2 368 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 GM2AP17900 193 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A6P19224 532 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A1P22309 533 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A4P22310 534 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A3P35503 534 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A5P35504 534 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 MMP13P45452 471 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 NT5C2P49902 561 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 GSTO1P78417 241 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 CCL15Q16663 113 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 CYP2A13Q16696 494 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 TRIM60Q495X7 471 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 EFHC1Q5JVL4 640 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 C6orf52Q5T4I8 152 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 STRIP1Q5VSL9 837 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UBE2UQ5VVX9 321 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 GALNT18Q6P9A2 607 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 C15orf52Q6ZUT6 534 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 RAPH1Q70E73 1250 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PTAR1Q7Z6K3 402 aaPredicted RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 CRLF3Q8IUI8 442 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 CKAP2Q8WWK9 683 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 TMEM120AQ9BXJ8 343 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A7Q9HAW7 530 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A10Q9HAW8 530 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UGT1A8Q9HAW9 530 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 SLC35C2Q9NQQ7 365 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 INIPQ9NRY2 104 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 FAIMQ9NVQ4 179 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 PKD2L2Q9NZM6 624 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 AURKCQ9UQB9 309 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 NAALADL1Q9UQQ1 740 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 APOBEC2Q9Y235 224 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 FAM32AQ9Y421 112 aaKnown RBP8.72□□□□□ -1.01
NDE1-202ENST00000396355 ST14Q9Y5Y6 855 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 SIPA1L1O43166 1804 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 GAKO14976 1311 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 UMODL1Q5DID0 1318 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 TOR1BO14657 336 aa8.72□□□□□ -1.01
NDE1-202ENST00000396355 SIN3BO75182 1162 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms