RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ARL14EPQ8N8R7 260 aaPredicted RBP20.18■□□□□ 0.82
HOXA9-202ENST00000396345 RSAD2Q8WXG1 361 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 NDRG1Q92597 394 aaKnown RBP20.18■□□□□ 0.82
HOXA9-202ENST00000396345 PPP1R13BQ96KQ4 1090 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 KXD1Q9BQD3 176 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 NUCKS1Q9H1E3 243 aaKnown RBP20.18■□□□□ 0.82
HOXA9-202ENST00000396345 NMUR1Q9HB89 426 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 LUC7L2Q9Y383 392 aaKnown RBP20.18■□□□□ 0.82
HOXA9-202ENST00000396345 NUP210Q8TEM1 1887 aaPredicted RBP20.18■□□□□ 0.82
HOXA9-202ENST00000396345 LSM8O95777 96 aaKnown RBP20.17■□□□□ 0.82
HOXA9-202ENST00000396345 OAS1P00973 400 aaKnown RBP20.17■□□□□ 0.82
HOXA9-202ENST00000396345 CKMP06732 381 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 CASP14P31944 242 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 CDH5P33151 784 aaPredicted RBP20.17■□□□□ 0.82
HOXA9-202ENST00000396345 VIPR2P41587 438 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 TUBP50607 506 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 DAOAP59103 153 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 ZBED6P86452 979 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 FMO1Q01740 532 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 TRIM14Q14142 442 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 TMEM110Q86TL2 294 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 E2F7Q96AV8 911 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 ELSPBP1Q96BH3 223 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 SLC22A12Q96S37 553 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 AGPAT1Q99943 283 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 MIS12Q9H081 205 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 SMG9Q9H0W8 520 aaKnown RBP20.17■□□□□ 0.82
HOXA9-202ENST00000396345 CCSER2Q9H7U1 834 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 OSER1Q9NX31 292 aa20.17■□□□□ 0.82
HOXA9-202ENST00000396345 E5RJQ4 531 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 DPYSL4O14531 572 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 ECI2O75521 394 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 PRAMEF12O95522 483 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 RALAP11233 206 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 RARGP13631 454 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 ZNF75DP51815 510 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 SNX16P57768 344 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 YWHAGP61981 247 aaKnown RBP eCLIP20.16■□□□□ 0.82
HOXA9-202ENST00000396345 E4F1Q66K89 784 aaPredicted RBP20.16■□□□□ 0.82
HOXA9-202ENST00000396345 TRIM72Q6ZMU5 477 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 BHLHA9Q7RTU4 235 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 SCUBE3Q8IX30 993 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 IRGQQ8WZA9 623 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 SYN2Q92777 582 aaPredicted RBP20.16■□□□□ 0.82
HOXA9-202ENST00000396345 CPXM1Q96SM3 734 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 RPP25Q9BUL9 199 aaKnown RBP20.16■□□□□ 0.82
HOXA9-202ENST00000396345 PLA2G2FQ9BZM2 168 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 RNF38Q9H0F5 515 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 CLIC5Q9NZA1 410 aa20.16■□□□□ 0.82
HOXA9-202ENST00000396345 YJEFN3A6XGL0 299 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 HEPACAM2A8MVW5 462 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 E7ENQ6 273 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 COCHO43405 550 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 TLR5O60602 858 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 OLFM2O95897 454 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 TPM1P09493 284 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 ZNF268Q14587 947 aaPredicted RBP20.15■□□□□ 0.82
HOXA9-202ENST00000396345 TMC6Q7Z403 805 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 SLC44A3Q8N4M1 653 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 CELF5Q8N6W0 485 aaKnown RBP20.15■□□□□ 0.82
HOXA9-202ENST00000396345 CLEC4CQ8WTT0 213 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 USP13Q92995 863 aaPredicted RBP20.15■□□□□ 0.82
HOXA9-202ENST00000396345 NACA2Q9H009 215 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 SYNCQ9H7C4 482 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 TDP1Q9NUW8 608 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 SEPT11Q9NVA2 429 aaKnown RBP20.15■□□□□ 0.82
HOXA9-202ENST00000396345 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.15■□□□□ 0.82
HOXA9-202ENST00000396345 TJP2Q9UDY2 1190 aa20.15■□□□□ 0.82
HOXA9-202ENST00000396345 PAPSS1O43252 624 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-202ENST00000396345 SART1O43290 800 aaKnown RBP20.14■□□□□ 0.81
HOXA9-202ENST00000396345 CYP1A1P04798 512 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-202ENST00000396345 MBL2P11226 248 aaPredicted RBP20.14■□□□□ 0.81
HOXA9-202ENST00000396345 PRKCIP41743 596 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 NOMO3P69849 1222 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 SLC7A9P82251 487 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 KLHL30Q0D2K2 578 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 TDGQ13569 410 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 PTPN20Q4JDL3 420 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 NAA35Q5VZE5 725 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 BTBD8Q5XKL5 378 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 TADA2BQ86TJ2 420 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 ERICH1Q86X53 443 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 ZNF276Q8N554 614 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 MSANTD4Q8NCY6 345 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 IPO4Q8TEX9 1081 aaKnown RBP20.14■□□□□ 0.81
HOXA9-202ENST00000396345 CPA5Q8WXQ8 436 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 GOLGA1Q92805 767 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 RSPRY1Q96DX4 576 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 MRFAP1L1Q96HT8 127 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 CDK5RAP1Q96SZ6 601 aaKnown RBP20.14■□□□□ 0.81
HOXA9-202ENST00000396345 PCDHB18PQ96TA0 734 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 HAUS4Q9H6D7 363 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 KIF9Q9HAQ2 790 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 OBP2AQ9NY56 170 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 MUTYHQ9UIF7 546 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 ARHGAP26Q9UNA1 814 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 SORCS3Q9UPU3 1222 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 CCL26Q9Y258 94 aa20.14■□□□□ 0.81
HOXA9-202ENST00000396345 FAM170AA1A519 330 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms