RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DEPDC1BQ8WUY9 529 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 ASIC4Q96FT7 647 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 ZFYVE19Q96K21 471 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 SMPD4Q9NXE4 827 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 IFNKQ9P0W0 207 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 NUDT5Q9UKK9 219 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 ARHGAP26Q9UNA1 814 aa17.41■□□□□ 0.38
CXCL1-201ENST00000395761 TMEM221A6NGB7 291 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 M0R296 226 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 MBL2P11226 248 aaPredicted RBP17.4■□□□□ 0.38
CXCL1-201ENST00000395761 RARGP13631 454 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 SOX5P35711 763 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 TUBP50607 506 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 PDE6CP51160 858 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 SLC7A9P82251 487 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 FCHO2Q0JRZ9 810 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 MEA1Q16626 185 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 TAF3Q5VWG9 929 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 BHLHA9Q7RTU4 235 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 NOP9Q86U38 636 aaKnown RBP17.4■□□□□ 0.38
CXCL1-201ENST00000395761 SIX6OS1Q8N1H7 587 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 HSFY1Q96LI6 401 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 BRD9Q9H8M2 597 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 KIF9Q9HAQ2 790 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 CYLDQ9NQC7 956 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 ST7Q9NRC1 585 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.4■□□□□ 0.38
CXCL1-201ENST00000395761 NAGPAQ9UK23 515 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 FBXL21Q9UKT6 434 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 PCDHGC3Q9UN70 934 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 DAAM1Q9Y4D1 1078 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 CPQQ9Y646 472 aa17.4■□□□□ 0.38
CXCL1-201ENST00000395761 NUP210Q8TEM1 1887 aaPredicted RBP17.39■□□□□ 0.38
CXCL1-201ENST00000395761 A0A1W2PQC6 194 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 ZNF263O14978 683 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 TLR5O60602 858 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 PDGFBP01127 241 aaPredicted RBP17.39■□□□□ 0.37
CXCL1-201ENST00000395761 KRT9P35527 623 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 STAT1P42224 750 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 RPL34P49207 117 aaKnown RBP17.39■□□□□ 0.37
CXCL1-201ENST00000395761 ZNF77Q15935 545 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 HFE2Q6ZVN8 426 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 SCUBE3Q8IX30 993 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 YAF2Q8IY57 180 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 SH3RF2Q8TEC5 729 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 CLEC4CQ8WTT0 213 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 DDX1Q92499 740 aaKnown RBP17.39■□□□□ 0.37
CXCL1-201ENST00000395761 ZFRQ96KR1 1074 aaKnown RBP17.39■□□□□ 0.37
CXCL1-201ENST00000395761 SLC4A5Q9BY07 1137 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 XPO4Q9C0E2 1151 aaKnown RBP17.39■□□□□ 0.37
CXCL1-201ENST00000395761 WNT16Q9UBV4 365 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 CA14Q9ULX7 337 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 TECTAO75443 2155 aa17.39■□□□□ 0.37
CXCL1-201ENST00000395761 KRBA1A5PL33 1030 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 YJEFN3A6XGL0 299 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 E7ENQ6 273 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 LEFTY2O00292 366 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 ARNTLO00327 626 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 MDM4O15151 490 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 CHADO15335 359 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 TPM3P06753 285 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 PBX1P40424 430 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 DAOAP59103 153 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 YWHAGP61981 247 aaKnown RBP eCLIP17.38■□□□□ 0.37
CXCL1-201ENST00000395761 USP4Q13107 963 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 SIX5Q8N196 739 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 EPS8L1Q8TE68 723 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 STK32AQ8WU08 396 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 SLC20A1Q8WUM9 679 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 IRF7Q92985 503 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 TRIM5Q9C035 493 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 MIS12Q9H081 205 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 LHX5Q9H2C1 402 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 CNGB3Q9NQW8 809 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 GKN1Q9NS71 199 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 CLIC5Q9NZA1 410 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 TJP2Q9UDY2 1190 aa17.38■□□□□ 0.37
CXCL1-201ENST00000395761 MYO16Q9Y6X6 1858 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 FAM170AA1A519 330 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 SCAMP3O14828 347 aaKnown RBP17.37■□□□□ 0.37
CXCL1-201ENST00000395761 GPR37L1O60883 481 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 MMEP08473 750 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 RALAP11233 206 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 TCF3P15923 654 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 PSEN1P49768 467 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 ARID5AQ03989 594 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 TNK2Q07912 1038 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 PDCLQ13371 301 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 MTF1Q14872 753 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 ARHGAP29Q52LW3 1261 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 SLC44A4Q53GD3 710 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 C10orf120Q5SQS8 335 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 TRIM68Q6AZZ1 485 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 TMEM110Q86TL2 294 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 SCML4Q8N228 414 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 ARHGAP18Q8N392 663 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 ZNF276Q8N554 614 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms