RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 F8VP50 259 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 HCRTO43612 131 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 CYP11A1P05108 521 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 URODP06132 367 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 GNL1P36915 607 aaPredicted RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 LHX1P48742 406 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 RPL34P49207 117 aaKnown RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 GLUD2P49448 558 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 TMC7Q7Z402 723 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 SPPL3Q8TCT6 385 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 RIN2Q8WYP3 895 aaPredicted RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 TRIM51Q9BSJ1 452 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 HERC2P3Q9BVR0 1158 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 OSBPL8Q9BZF1 889 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 PLEKHA4Q9H4M7 779 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 CHST7Q9NS84 486 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 H3BNC9 293 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 GRM6O15303 877 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 PDGFRBP09619 1106 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 ACAT1P24752 427 aaKnown RBP15.83■□□□□ 0.12
SCAF11-204ENST00000395454 LMO2P25791 158 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 SLC25A11Q02978 314 aaKnown RBP15.83■□□□□ 0.12
SCAF11-204ENST00000395454 GPM6BQ13491 265 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 TAZQ16635 292 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 SPDYCQ5MJ68 293 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 PRSS55Q6UWB4 352 aaPredicted RBP15.83■□□□□ 0.12
SCAF11-204ENST00000395454 SYDE1Q6ZW31 735 aaPredicted RBP15.83■□□□□ 0.12
SCAF11-204ENST00000395454 DDX42Q86XP3 938 aaKnown RBP eCLIP15.83■□□□□ 0.12
SCAF11-204ENST00000395454 IPO4Q8TEX9 1081 aaKnown RBP15.83■□□□□ 0.12
SCAF11-204ENST00000395454 AUTS2Q8WXX7 1259 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 TCF25Q9BQ70 676 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 SLC4A5Q9BY07 1137 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 TXLNGYQ9BZA5 131 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 ZNF576Q9H609 170 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 ENTPD7Q9NQZ7 604 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 DDX56Q9NY93 547 aaKnown RBP15.83■□□□□ 0.12
SCAF11-204ENST00000395454 LZTS1Q9Y250 596 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 EFR3BQ9Y2G0 817 aa15.83■□□□□ 0.12
SCAF11-204ENST00000395454 GABRDO14764 452 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 LRCH4O75427 683 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 RALAP11233 206 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 TCF4P15884 667 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 WARSP23381 471 aaKnown RBP15.82■□□□□ 0.12
SCAF11-204ENST00000395454 DNAJB1P25685 340 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 UBE3AQ05086 875 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 HSP90B2PQ58FF3 399 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 ZNF280DQ6N043 979 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 DRICH1Q6PGQ1 229 aaPredicted RBP15.82■□□□□ 0.12
SCAF11-204ENST00000395454 ANKS3Q6ZW76 656 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 TMEM110Q86TL2 294 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 OSTM1Q86WC4 334 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 THEM5Q8N1Q8 247 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 ARFGAP1Q8N6T3 406 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 JOSD2Q8TAC2 188 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 GDPD5Q8WTR4 605 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 SLC35F5Q8WV83 523 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 SLITRK1Q96PX8 696 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 DCLK3Q9C098 648 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 ZBP1Q9H171 429 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 CYLDQ9NQC7 956 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 TLR9Q9NR96 1032 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 MRPL17Q9NRX2 175 aaKnown RBP15.82■□□□□ 0.12
SCAF11-204ENST00000395454 GRHL1Q9NZI5 618 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 EPOPA6NHQ4 379 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 OAZ2O95190 189 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 CTSAP10619 480 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 GGCXP38435 758 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 DSG1Q02413 1049 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 HLTFQ14527 1009 aaKnown RBP eCLIP15.82■□□□□ 0.12
SCAF11-204ENST00000395454 PSMD5Q16401 504 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 CCNG2Q16589 344 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 GOLGA7BQ2TAP0 167 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 CTXN3Q4LDR2 81 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 PPP1R26Q5T8A7 1209 aaPredicted RBP15.82■□□□□ 0.12
SCAF11-204ENST00000395454 ZDHHC24Q6UX98 284 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 ANKS1BQ7Z6G8 1248 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 TTC30AQ86WT1 665 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 C12orf29Q8N999 325 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 MICAL1Q8TDZ2 1067 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 PIK3R5Q8WYR1 880 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 LRRC45Q96CN5 670 aa15.82■□□□□ 0.12
SCAF11-204ENST00000395454 RPL17P18621 184 aaKnown RBP15.81■□□□□ 0.12
SCAF11-204ENST00000395454 PCK1P35558 622 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 SCNN1AP37088 669 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 ERVFC1P60507 584 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 KIAA0319Q5VV43 1072 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 PLPP4Q5VZY2 271 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 ACOT1Q86TX2 421 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 ZDHHC17Q8IUH5 632 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 SPATA18Q8TC71 538 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 DPEP3Q9H4B8 488 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 SYNCQ9H7C4 482 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 METTL5Q9NRN9 209 aaKnown RBP15.81■□□□□ 0.12
SCAF11-204ENST00000395454 USTQ9Y2C2 406 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 NEU2Q9Y3R4 380 aa15.81■□□□□ 0.12
SCAF11-204ENST00000395454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 C3orf70A6NLC5 250 aaPredicted RBP15.8■□□□□ 0.12
SCAF11-204ENST00000395454 C2CD4BA6NLJ0 364 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 GOLGA8SH3BPF8 625 aa15.8■□□□□ 0.12
SCAF11-204ENST00000395454 RFXAPO00287 272 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms