RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 O00370 1275 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 DGKIO75912 1065 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 RGS9O75916 674 aaPredicted RBP12.06□□□□□ -0.48
RTN1-203ENST00000395090 LHX1P48742 406 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 GNG11P61952 73 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 GPC5P78333 572 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
RTN1-203ENST00000395090 STILQ15468 1287 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 SGO2Q562F6 1265 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 LCLAT1Q6UWP7 414 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 PHF13Q86YI8 300 aaPredicted RBP12.06□□□□□ -0.48
RTN1-203ENST00000395090 ADGRF2Q8IZF7 708 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 MRPL9Q9BYD2 267 aaKnown RBP12.06□□□□□ -0.48
RTN1-203ENST00000395090 SNX25Q9H3E2 840 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 NRDE2Q9H7Z3 1164 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 IL23AQ9NPF7 189 aa12.06□□□□□ -0.48
RTN1-203ENST00000395090 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.06□□□□□ -0.48
RTN1-203ENST00000395090 A0A096LPE4 126 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 A0A1W2PPZ6 126 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 A8MXQ7 604 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 FANCGO15287 622 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 BAIAP3O94812 1187 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 ALDH2P05091 517 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 CD19P15391 556 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 MMP8P22894 467 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 GATMP50440 423 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 SPRED3Q2MJR0 410 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 MEI1Q5TIA1 1274 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 NAA35Q5VZE5 725 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 ARHGAP17Q68EM7 881 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 DSTYKQ6XUX3 929 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 ACOT1Q86TX2 421 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 OSTM1Q86WC4 334 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 MCOLN2Q8IZK6 566 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 C12orf29Q8N999 325 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 TMEM35BQ8NCS4 154 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 CPA5Q8WXQ8 436 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 CTNNBL1Q8WYA6 563 aaPredicted RBP12.05□□□□□ -0.48
RTN1-203ENST00000395090 TTC9Q92623 222 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 SECISBP2LQ93073 1101 aaKnown RBP12.05□□□□□ -0.48
RTN1-203ENST00000395090 FAM193BQ96PV7 902 aaPredicted RBP12.05□□□□□ -0.48
RTN1-203ENST00000395090 WDR24Q96S15 920 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 TMEM175Q9BSA9 504 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 DNAI2Q9GZS0 605 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 THAP2Q9H0W7 228 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 PDCL3Q9H2J4 239 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 ZFYVE1Q9HBF4 777 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 DNAJB4Q9UDY4 337 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 DSEQ9UL01 958 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 STARD13Q9Y3M8 1113 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 PAXBP1Q9Y5B6 917 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 MICAL3Q7RTP6 2002 aa12.05□□□□□ -0.48
RTN1-203ENST00000395090 MKI67P46013 3256 aaKnown RBP12.05□□□□□ -0.48
RTN1-203ENST00000395090 ARHGEF37A1IGU5 675 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 MACROD2A1Z1Q3 448 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 OIP5O43482 229 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 CYP1A2P05177 515 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 ITGB1P05556 798 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 PDGFRBP09619 1106 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 MYBL1P10243 752 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 TYMPP19971 482 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 ITPKAP23677 461 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 GPD2P43304 727 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 NSFP46459 744 aaKnown RBP12.04□□□□□ -0.48
RTN1-203ENST00000395090 HADHBP55084 474 aaKnown RBP12.04□□□□□ -0.48
RTN1-203ENST00000395090 PTP4A2Q12974 167 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 SYT10Q6XYQ8 523 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 MON1BQ7L1V2 547 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 SLC35G2Q8TBE7 412 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 NUDT8Q8WV74 236 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
RTN1-203ENST00000395090 TNIP3Q96KP6 325 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 NOX5Q96PH1 765 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 METTL5Q9NRN9 209 aaKnown RBP12.04□□□□□ -0.48
RTN1-203ENST00000395090 DNAI1Q9UI46 699 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 GTF3C4Q9UKN8 822 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 TRIM33Q9UPN9 1127 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 NCANO14594 1321 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 TBKBP1A7MCY6 615 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 F8W810 466 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 NRP1O14786 923 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 HCRTO43612 131 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 TRAPPC3O43617 180 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 MTA2O94776 668 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 AMHP03971 560 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 GALTP07902 379 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 ODC1P11926 461 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 ABCB4P21439 1286 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 BRCC3P46736 316 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
RTN1-203ENST00000395090 PPIGQ13427 754 aaKnown RBP eCLIP12.04□□□□□ -0.48
RTN1-203ENST00000395090 DENND1BQ6P3S1 775 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 RHOT2Q8IXI1 618 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 KIF18AQ8NI77 898 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 RFFLQ8WZ73 363 aa12.04□□□□□ -0.48
RTN1-203ENST00000395090 ARHGEF26Q96DR7 871 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms