RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 SDR42E2A6NKP2 422 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 B2RBV5 119 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 PWP1Q13610 501 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 BTG3Q14201 252 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 FAM131BQ86XD5 332 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 TUBGCP3Q96CW5 907 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ZNF333Q96JL9 665 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 CCDC134Q9H6E4 229 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 DDX28Q9NUL7 540 aaKnown RBP10.73□□□□□ -0.69
COL4A6-203ENST00000394872 DCDC2Q9UHG0 476 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 ITSN1Q15811 1721 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 DAB1O75553 588 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 INSRRP14616 1297 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 AKAP5P24588 427 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 SOX10P56693 466 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 C4orf19Q8IY42 314 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 VMP1Q96GC9 406 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 SEC16BQ96JE7 1060 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 CCDC3Q9BQI4 270 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 IGFLR1Q9H665 355 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 TFR2Q9UP52 801 aa10.73□□□□□ -0.69
COL4A6-203ENST00000394872 DEAF1O75398 565 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 SKAP2O75563 359 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 MAPK1P28482 360 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 STARD3Q14849 445 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 PTGISQ16647 500 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 OVOS1Q6IE37 1185 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 ZNF518BQ9C0D4 1074 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 ILKAPQ9H0C8 392 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 ASCC2Q9H1I8 757 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 RMND5AQ9H871 391 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 XPNPEP3Q9NQH7 507 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 CISHQ9NSE2 258 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 RPS6KB2Q9UBS0 482 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 PRR23D1E9PI22 279 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 TSPAN3O60637 253 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 GLRA3O75311 464 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 PRR23D2P0DMB1 279 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 MAPK9P45984 424 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 FNTAP49354 379 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 NFE2Q16621 373 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 IYDQ6PHW0 289 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 THAP11Q96EK4 314 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 APPL1Q9UKG1 709 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 PLEKP08567 350 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 TAL1P17542 331 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 CLEC17AQ6ZS10 378 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 SOCS4Q8WXH5 440 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 CYP3A43Q9HB55 503 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 USE1Q9NZ43 259 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 DRG1Q9Y295 367 aaKnown RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 MORC2Q9Y6X9 1032 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 LOC100653049A0A140TA62 436 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 RASSF10A6NK89 507 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 ADM5C9JUS6 153 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 EIF3HO15372 352 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 PLA2G6O60733 806 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 RASSF9O75901 435 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 KRT34O76011 436 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 HPGDP15428 266 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 ADORA2AP29274 412 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 SLC29A2Q14542 456 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 CCDC142Q17RM4 750 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 FAM171A1Q5VUB5 890 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 NT5DC4Q86YG4 428 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 FBXO36Q8NEA4 188 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 ATG4AQ8WYN0 398 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 CNDP1Q96KN2 507 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 LRRC40Q9H9A6 602 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 EXOSC4Q9NPD3 245 aaKnown RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 IFRD1O00458 451 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 GHRP10912 638 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 RANBP1P43487 201 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 OTUD4Q01804 1114 aaKnown RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 RUNX1T1Q06455 604 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 TLK2Q86UE8 772 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 ATP8B4Q8TF62 1192 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 CCDC126Q96EE4 140 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 SYT15Q9BQS2 421 aa10.72□□□□□ -0.69
COL4A6-203ENST00000394872 PPRC1Q5VV67 1664 aaKnown RBP10.72□□□□□ -0.69
COL4A6-203ENST00000394872 GLP2RO95838 553 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 CYP51A1Q16850 503 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 P3H2Q8IVL5 708 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 ZIM3Q96PE6 472 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 APOL2Q9BQE5 337 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 OSBPL10Q9BXB5 764 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 GLIS2Q9BZE0 524 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-203ENST00000394872 MPP6Q9NZW5 540 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 TRIM17Q9Y577 477 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 AKR1A1P14550 325 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 SCNN1BP51168 640 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 TRPM8Q7Z2W7 1104 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 SLC47A2Q86VL8 602 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 CCNJLQ8IV13 435 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 MMGT1Q8N4V1 131 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 PDCD2LQ9BRP1 358 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 ATXN3LQ9H3M9 355 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms