RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ACTR5Q9H9F9 607 aaPredicted RBP7.29□□□□□ -1.24
RTN4-205ENST00000394609 IP6K2Q9UHH9 426 aa7.29□□□□□ -1.24
RTN4-205ENST00000394609 DMGDHQ9UI17 866 aaKnown RBP7.29□□□□□ -1.24
RTN4-205ENST00000394609 STRIP2Q9ULQ0 834 aa7.29□□□□□ -1.24
RTN4-205ENST00000394609 TRIP11Q15643 1979 aa7.29□□□□□ -1.24
RTN4-205ENST00000394609 TCRBV7S2A1N4TA0A589 114 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 SIGLEC16A6NMB1 481 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 CLDN5O00501 218 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 B4GALT3O60512 393 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GRAP2O75791 330 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 ITGB1P05556 798 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 SKIP12755 728 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 HSPA6P17066 643 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 WARSP23381 471 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 CTNNA2P26232 953 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 RPL9P32969 192 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 RDXP35241 583 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 SLC1A1P43005 524 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 PTGIRP43119 386 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 BRCC3P46736 316 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 CCL23P55773 120 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 BFSP2Q13515 415 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TAF5Q15542 800 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 PREPLQ4J6C6 727 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 ATP13A4Q4VNC1 1196 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 CLLU1OSQ5K130 101 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 FAM102AQ5T9C2 384 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 KIAA0319Q5VV43 1072 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 OR6B2Q6IFH4 312 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 C8orf74Q6P047 294 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GLB1LQ6UWU2 654 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 ZNF280BQ86YH2 543 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 MREGQ8N565 214 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 OTUD6BQ8N6M0 293 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 B3GALNT2Q8NCR0 500 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 SLC35F5Q8WV83 523 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 ACSF2Q96CM8 615 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 SCLYQ96I15 445 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 PIWIL1Q96J94 861 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 B3GNT5Q9BYG0 378 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 MIS12Q9H081 205 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 DDX47Q9H0S4 455 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 UBN1Q9NPG3 1134 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 KLHL11Q9NVR0 708 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 DDX43Q9NXZ2 648 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 HESX1Q9UBX0 185 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TMEM59LQ9UK28 342 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 ZSCAN5CA6NGD5 496 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 ENPP3O14638 875 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GABRDO14764 452 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 DDHD2O94830 711 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GLI1P08151 1106 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 PTPN1P18031 435 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 PSMA2P25787 234 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GABRB2P47870 512 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 LIG3P49916 1009 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TLE2Q04725 743 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GRIK3Q13003 919 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TUSC3Q13454 348 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 ZNF268Q14587 947 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 STILQ15468 1287 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TCTN1Q2MV58 587 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 MDH1BQ5I0G3 518 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 RNFT1Q5M7Z0 435 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 ZFYVE27Q5T4F4 411 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 ARHGAP17Q68EM7 881 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TXNRD3NBQ6F5E7 133 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 SLC39A5Q6ZMH5 540 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 KDM7AQ6ZMT4 941 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 FAM183BPQ6ZVS7 135 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 RHOT1Q8IXI2 618 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GSPT2Q8IYD1 628 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 ZDHHC14Q8IZN3 488 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 GPATCH11Q8N954 259 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 DIS3LQ8TF46 1054 aaKnown RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 ZBTB9Q96C00 473 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 SCARF2Q96GP6 870 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 TNIP3Q96KP6 325 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 AMACRQ9UHK6 382 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 TTC7AQ9ULT0 858 aaPredicted RBP7.28□□□□□ -1.24
RTN4-205ENST00000394609 SUFUQ9UMX1 484 aa7.28□□□□□ -1.24
RTN4-205ENST00000394609 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.28□□□□□ -1.24
RTN4-205ENST00000394609 ESYT3A0FGR9 886 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 MYBPHLA2RUH7 354 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 PI4K2BG5E9Z4 385 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 SART1O43290 800 aaKnown RBP7.27□□□□□ -1.25
RTN4-205ENST00000394609 RAD51CO43502 376 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 EOMESO95936 686 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 IGHA1P01876 353 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 MYBL2P10244 700 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 LCP1P13796 627 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 CYP2C18P33260 490 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 GATMP50440 423 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 RABGGTBP53611 331 aa7.27□□□□□ -1.25
RTN4-205ENST00000394609 FAM189BP81408 668 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms