RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 XPO1O14980 1071 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 ESRRBO95718 433 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ADRB2P07550 413 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PDGFRBP09619 1106 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ARL2P36404 184 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TAF6P49848 677 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 DYNLT1P63172 113 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TRIM16LQ309B1 348 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 LGSNQ5TDP6 509 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SPOPLQ6IQ16 392 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SLC27A1Q6PCB7 646 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 IYDQ6PHW0 289 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 NUDCD3Q8IVD9 361 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ZBTB8BQ8NAP8 495 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 FAM13CQ8NE31 585 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TPCN2Q8NHX9 752 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CRYGNQ8WXF5 182 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 INPP5DQ92835 1189 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 RNF25Q96BH1 459 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 PGM2Q96G03 612 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CCT7Q99832 543 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 KLHL25Q9H0H3 589 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 THAP2Q9H0W7 228 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 GANQ9H2C0 597 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CYP3A43Q9HB55 503 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ALG13Q9NP73 1137 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 GID8Q9NWU2 228 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 DDX56Q9NY93 547 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 TXNDC16Q9P2K2 825 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PRKAG2Q9UGJ0 569 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ADAMTS5Q9UNA0 930 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SLC12A4Q9UP95 1085 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PCDHA2Q9Y5H9 948 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SMIM31A0A1B0GVY4 71 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 EPHB6O15197 1021 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 KRT36O76013 467 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PSMG1O95456 288 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 MT-ND3P03897 115 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 OCM2P0CE71 109 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 OCMP0CE72 109 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 SMIM10L2AP0DMW4 78 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SMIM10L2BP0DMW5 78 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 HNRNPH3P31942 346 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 GNL1P36915 607 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 ARL1P40616 181 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 PRKCIP41743 596 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SP2Q02086 613 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 OCA2Q04671 838 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CCDC15Q0P6D6 951 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 AP1B1Q10567 949 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 BNIP1Q12981 228 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ATP1A4Q13733 1029 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CNPY1Q3B7I2 92 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 RARS2Q5T160 578 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 WDR59Q6PJI9 974 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TRMT10CQ7L0Y3 403 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 MTDHQ86UE4 582 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 SLC47A2Q86VL8 602 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 NT5DC4Q86YG4 428 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 REM2Q8IYK8 340 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 C4orf33Q8N1A6 199 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 BSNDQ8WZ55 320 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 BAP1Q92560 729 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 HSPH1Q92598 858 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 MAGEB18Q96M61 343 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 MFSD14AQ96MC6 490 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 HEMGNQ9BXL5 484 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PACSIN1Q9BY11 444 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 MRPL1Q9BYD6 325 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 ADAM33Q9BZ11 813 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PAIP1Q9H074 479 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 IKZF4Q9H2S9 585 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SEMA4AQ9H3S1 761 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TRABDQ9H4I3 376 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ZC4H2Q9NQZ6 224 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CISHQ9NSE2 258 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SNTG2Q9NY99 539 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 DKK3Q9UBP4 350 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ZNF212Q9UDV6 495 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SBF2Q86WG5 1849 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 DOCK2Q92608 1830 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 A0A1B0GUL6 1792 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 COL1A2P08123 1366 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 A0A0A6YYK5 440 aaPredicted RBP5.9□□□□□ -1.46
RFFL-202ENST00000394597 C5orf60A6NFR6 353 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 LACTBL1A8MY62 500 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 DCDC2CA8MYV0 355 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 NEK2P51955 445 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 ARPC4P59998 168 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 TFDP2Q14188 446 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 ARL13BQ3SXY8 428 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 ISLR2Q6UXK2 745 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 TSHZ1Q6ZSZ6 1077 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 ZNF467Q7Z7K2 595 aaPredicted RBP5.9□□□□□ -1.46
RFFL-202ENST00000394597 SCUBE1Q8IWY4 988 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 TTC13Q8NBP0 860 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 PPP4R1Q8TF05 950 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 RNF139Q8WU17 664 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 TSNARE1Q96NA8 513 aa5.9□□□□□ -1.46
RFFL-202ENST00000394597 C10orf88Q9H8K7 445 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms