RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 PPWD1Q96BP3 646 aaKnown RBP16.74■□□□□ 0.27
PCDH1-203ENST00000394536 CADM1Q9BY67 442 aaKnown RBP16.74■□□□□ 0.27
PCDH1-203ENST00000394536 ZNF395Q9H8N7 513 aaPredicted RBP16.74■□□□□ 0.27
PCDH1-203ENST00000394536 LGR5O75473 907 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 MICAL2O94851 1124 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 MED21Q13503 144 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 BOLA3Q53S33 107 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 EEF1DP3Q658K8 133 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 ANKS1BQ7Z6G8 1248 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 FAM131BQ86XD5 332 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 PYDC1Q8WXC3 89 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 LRGUKQ96M69 825 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 TRIM56Q9BRZ2 755 aaKnown RBP16.74■□□□□ 0.27
PCDH1-203ENST00000394536 GRID1Q9ULK0 1009 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 STAG3L1P0CL83 205 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 SLC25A3Q00325 362 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 MAP7Q14244 749 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 TMEM132BQ14DG7 1078 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 MPZL3Q6UWV2 235 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 C4orf50Q6ZRC1 276 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 MCUQ8NE86 351 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 STRA6Q9BX79 667 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 SLC5A4Q9NY91 659 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 TSPAN16Q9UKR8 245 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 LRCH1Q9Y2L9 728 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 COMMD10Q9Y6G5 202 aa16.74■□□□□ 0.27
PCDH1-203ENST00000394536 GOLGA8QA0A0J9YX86 632 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 GOLGA8OA6NCC3 632 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 GOLGA8NF8WBI6 632 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 PPP1R12AO14974 1030 aaPredicted RBP16.73■□□□□ 0.27
PCDH1-203ENST00000394536 KCNA2P16389 499 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 MX2P20592 715 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 NDST1P52848 882 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 MAP3K21Q5TCX8 1036 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 SH3PXD2AQ5TCZ1 1133 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 TMPRSS6Q8IU80 811 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 C12orf29Q8N999 325 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 APOL2Q9BQE5 337 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 SLC4A7Q9Y6M7 1214 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 hCG_2014768A0A024R1R8 64 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 KLRG2A4D1S0 409 aaPredicted RBP16.73■□□□□ 0.27
PCDH1-203ENST00000394536 GPC4O75487 556 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 ACADSP16219 412 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 ATP6V1C1P21283 382 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 ACVR2BQ13705 512 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 FASTKD1Q53R41 847 aaKnown RBP16.73■□□□□ 0.27
PCDH1-203ENST00000394536 ABHD15Q6UXT9 468 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 GSDMBQ8TAX9 411 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 C10orf82Q8WW14 230 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 NKD2Q969F2 451 aaPredicted RBP16.73■□□□□ 0.27
PCDH1-203ENST00000394536 FBXL18Q96ME1 805 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 CENPKQ9BS16 269 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 PEX11AO75192 247 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 ZMPSTE24O75844 475 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 IL1R2P27930 398 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 GPX6P59796 221 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 KLF1Q13351 362 aaPredicted RBP16.73■□□□□ 0.27
PCDH1-203ENST00000394536 EFHC2Q5JST6 749 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 SERAC1Q96JX3 654 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 VCX3AQ9NNX9 186 aa16.73■□□□□ 0.27
PCDH1-203ENST00000394536 E9PBE3 544 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 KLHL41O60662 606 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 TCEA3O75764 348 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 VTNP04004 478 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 RBP5P82980 135 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 PTP4A2Q12974 167 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 UBAP2LQ14157 1087 aaKnown RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 GALNTL6Q49A17 601 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 TCHHL1Q5QJ38 904 aaPredicted RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 RNF220Q5VTB9 566 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 SPATA24Q86W54 205 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 TAS2R1Q9NYW7 299 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 RPS6KL1Q9Y6S9 549 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 NFICP08651 508 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 ALADP13716 330 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 ENO3P13929 434 aaPredicted RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 SIX6OS1Q8N1H7 587 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 RNF148Q8N7C7 305 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 TAGLN3Q9UI15 199 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 A0A087WZ62 844 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 USP1O94782 785 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 NPTXRO95502 500 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 UBA1P22314 1058 aaKnown RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 PAPOLAP51003 745 aaKnown RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 N4BP2L1Q5TBK1 243 aaPredicted RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 RNF135Q8IUD6 432 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 ZNF526Q8TF50 670 aaPredicted RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 PTPRN2Q92932 1015 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 FDXACB1Q9BRP7 624 aaPredicted RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
PCDH1-203ENST00000394536 BFARQ9NZS9 450 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 NR2E3Q9Y5X4 410 aa16.72■□□□□ 0.27
PCDH1-203ENST00000394536 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 USP12O75317 370 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ACO1P21399 889 aaKnown RBP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 COPAP53621 1224 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 BLMHQ13867 455 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 DCAF6Q58WW2 860 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms