RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 SMARCB1Q12824 385 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 KLF1Q13351 362 aaPredicted RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 SMC1AQ14683 1233 aaKnown RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 GLE1Q53GS7 698 aaKnown RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 KCNT1Q5JUK3 1230 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 MFSD7Q6UXD7 560 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 BNIPLQ7Z465 357 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 PRELID2Q8N945 189 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 PGLYRP2Q96PD5 576 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 OSBPL8Q9BZF1 889 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 DDX47Q9H0S4 455 aaKnown RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 CXXC1Q9P0U4 656 aaPredicted RBP21.24■□□□□ 0.99
HDDC3-202ENST00000394272 BACE2Q9Y5Z0 518 aa21.24■□□□□ 0.99
HDDC3-202ENST00000394272 GOLGA6L10A0A0M3HER8 536 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 MTMR11A4FU01 709 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 C3orf70A6NLC5 250 aaPredicted RBP21.23■□□□□ 0.99
HDDC3-202ENST00000394272 PI4K2BG5E9Z4 385 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 VNN2O95498 520 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 RARAP10276 462 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 CPB1P15086 417 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 PTPN7P35236 360 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 SLC5A3P53794 718 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 COPS2P61201 443 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 LLGL1Q15334 1064 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 SLC25A52Q3SY17 297 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 SLC8B1Q6J4K2 584 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 C8orf74Q6P047 294 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 PSRC1Q6PGN9 363 aaPredicted RBP21.23■□□□□ 0.99
HDDC3-202ENST00000394272 STRADAQ7RTN6 431 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 KLHL7Q8IXQ5 586 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 ATAD1Q8NBU5 361 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 CMASQ8NFW8 434 aaPredicted RBP21.23■□□□□ 0.99
HDDC3-202ENST00000394272 TMEM169Q96HH4 297 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 C8orf48Q96LL4 319 aa21.23■□□□□ 0.99
HDDC3-202ENST00000394272 MYO16Q9Y6X6 1858 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 PRPSAP2O60256 369 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 PPP2R5EQ16537 467 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 CYP1B1Q16678 543 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 DCAF6Q58WW2 860 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 ZFYVE27Q5T4F4 411 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 OTUD1Q5VV17 481 aaPredicted RBP21.22■□□□□ 0.99
HDDC3-202ENST00000394272 CCDC70Q6NSX1 233 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 SPOCD1Q6ZMY3 1216 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 FBXO22Q8NEZ5 403 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 SCAMP5Q8TAC9 235 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 SPPL2BQ8TCT7 592 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 HDAC7Q8WUI4 952 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 RIN2Q8WYP3 895 aaPredicted RBP21.22■□□□□ 0.99
HDDC3-202ENST00000394272 TBCBQ99426 244 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 NPY6RQ99463 290 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 CALCOCO1Q9P1Z2 691 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 RAB21Q9UL25 225 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 CDY1Q9Y6F8 540 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 GREB1Q4ZG55 1949 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 ZNF638Q14966 1978 aaKnown RBP21.22■□□□□ 0.99
HDDC3-202ENST00000394272 LRRD1A4D1F6 860 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 TRIM66O15016 1216 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 LTFP02788 710 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 CDKN2BP42772 138 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 ARPP19P56211 112 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 MRPS25P82663 173 aaKnown RBP21.22■□□□□ 0.99
HDDC3-202ENST00000394272 PSMD5Q16401 504 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 SYPL2Q5VXT5 272 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 RNF19BQ6ZMZ0 732 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 SCN4BQ8IWT1 228 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 TTC9BQ8N6N2 239 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 HERC2P3Q9BVR0 1158 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 SLITRK6Q9H5Y7 841 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 SPG21Q9NZD8 308 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 MTUS1Q9ULD2 1270 aa21.22■□□□□ 0.99
HDDC3-202ENST00000394272 PLXNA3P51805 1871 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 ENDOD1O94919 500 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 LINC00271P0C7V0 271 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 H2AFXP16104 143 aaPredicted RBP21.21■□□□□ 0.99
HDDC3-202ENST00000394272 KDELR1P24390 212 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 CETN2P41208 172 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 TAZQ16635 292 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 C2orf15Q8WU43 125 aaKnown RBP21.21■□□□□ 0.99
HDDC3-202ENST00000394272 TEKT4Q8WW24 435 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 MAIP1Q8WWC4 291 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 CRISPLD1Q9H336 500 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 DMGDHQ9UI17 866 aaKnown RBP21.21■□□□□ 0.99
HDDC3-202ENST00000394272 STAP1Q9ULZ2 295 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 NAALADL1Q9UQQ1 740 aa21.21■□□□□ 0.99
HDDC3-202ENST00000394272 hCG_1818297A0A087WSY0 165 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 ADAM12O43184 909 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 RAD51CO43502 376 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 PHF2O75151 1096 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 GPR15P49685 360 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 SULT1E1P49888 294 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 ATXN1P54253 815 aaKnown RBP21.2■□□□□ 0.98
HDDC3-202ENST00000394272 PITX1P78337 314 aaPredicted RBP21.2■□□□□ 0.98
HDDC3-202ENST00000394272 DSG1Q02413 1049 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 DDR2Q16832 855 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 BOLA3Q53S33 107 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 ODF2Q5BJF6 829 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 TFDP3Q5H9I0 405 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 WDR93Q6P2C0 686 aa21.2■□□□□ 0.98
HDDC3-202ENST00000394272 DDX53Q86TM3 631 aaKnown RBP21.2■□□□□ 0.98
HDDC3-202ENST00000394272 C12orf50Q8NA57 414 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms