RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 FRMD8Q9BZ67 464 aaPredicted RBP19.61■□□□□ 0.73
CBX1-202ENST00000393408 MINDY3Q9H8M7 445 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 C2orf71A6NGG8 1288 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 GYG2O15488 501 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 MYL2P10916 166 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 VDRP11473 427 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 FAM91A1Q658Y4 838 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 JADE1Q6IE81 842 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 RINLQ6ZS11 566 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 APOBEC3FQ8IUX4 373 aaKnown RBP19.61■□□□□ 0.73
CBX1-202ENST00000393408 PLD5Q8N7P1 536 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 PPM1NQ8N819 430 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 OXNAD1Q96HP4 312 aaPredicted RBP19.61■□□□□ 0.73
CBX1-202ENST00000393408 CYP3A43Q9HB55 503 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 PLAC1Q9HBJ0 212 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 POPDC2Q9HBU9 364 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 ZNF180Q9UJW8 692 aa19.61■□□□□ 0.73
CBX1-202ENST00000393408 A6NHS1 94 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 E5RJQ4 531 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 GPR25O00155 361 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 KCNN4O15554 427 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 PDGFRAP16234 1089 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 DALRD3Q5D0E6 543 aaKnown RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 TREML2Q5T2D2 321 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 CAPRIN2Q6IMN6 1127 aaKnown RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 PLPPR4Q7Z2D5 763 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 TTC7BQ86TV6 843 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 SPDL1Q96EA4 605 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 PIWIL1Q96J94 861 aaKnown RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 VRTNQ9H8Y1 702 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 CXorf49A8MYA2 514 aaPredicted RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 FCHO1O14526 889 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 PRPSAP2O60256 369 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 SNRPAP09012 282 aaKnown RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 IQCF3P0C7M6 154 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 IL4RP24394 825 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 GCLCP48506 637 aaPredicted RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 ANO7Q6IWH7 933 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 FAM183BPQ6ZVS7 135 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 APBB1IPQ7Z5R6 666 aaPredicted RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 CAND1Q86VP6 1230 aaKnown RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 CTAGE3PQ8IX95 158 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 HEXIM2Q96MH2 286 aaKnown RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 OSBPL1AQ9BXW6 950 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 IQCGQ9H095 443 aaKnown RBP19.6■□□□□ 0.73
CBX1-202ENST00000393408 TAS2R1Q9NYW7 299 aa19.6■□□□□ 0.73
CBX1-202ENST00000393408 PTPRFP10586 1907 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 FAM237BA0A1B0GVD1 139 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 PIK3R2O00459 728 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 KRT37O76014 449 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 NEBLO76041 1014 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ACADSP16219 412 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 CYP3A5P20815 502 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 PRKCHP24723 683 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ATICP31939 592 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 GCKP35557 465 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 MAP1SQ66K74 1059 aaPredicted RBP19.59■□□□□ 0.73
CBX1-202ENST00000393408 CCDC62Q6P9F0 684 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ILDR2Q71H61 639 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 STOML1Q9UBI4 398 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ZC3H7BQ9UGR2 993 aaKnown RBP19.59■□□□□ 0.73
CBX1-202ENST00000393408 PLLPQ9Y342 182 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 KAT6AQ92794 2004 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ESRRAP11474 423 aaPredicted RBP19.59■□□□□ 0.73
CBX1-202ENST00000393408 MAGEA6P43360 314 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 KRT81Q14533 505 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 TSNAXIP1Q2TAA8 658 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ACSBG2Q5FVE4 666 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 OR6B2Q6IFH4 312 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 PQLC3Q8N755 202 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 DNAJC9Q8WXX5 260 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ZBTB10Q96DT7 871 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 ZFATQ9P243 1243 aa19.59■□□□□ 0.73
CBX1-202ENST00000393408 TRDMT1O14717 391 aaKnown RBP19.58■□□□□ 0.72
CBX1-202ENST00000393408 STAG3L1P0CL83 205 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 RARBP10826 455 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 TGM2P21980 687 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 OSBPP22059 807 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 RBL1P28749 1068 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 CCNFP41002 786 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 CLCN3P51790 818 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 MRPS5P82675 430 aaKnown RBP19.58■□□□□ 0.72
CBX1-202ENST00000393408 KPNB1Q14974 876 aaKnown RBP19.58■□□□□ 0.72
CBX1-202ENST00000393408 PDK2Q15119 407 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 CDO1Q16878 200 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 CELF3Q5SZQ8 465 aaKnown RBP19.58■□□□□ 0.72
CBX1-202ENST00000393408 FAXCQ5TGI0 409 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 DPH6Q7L8W6 267 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 NCAPG2Q86XI2 1143 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 MAP7D3Q8IWC1 876 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 VPS52Q8N1B4 723 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 MCUR1Q96AQ8 359 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 C7orf26Q96N11 449 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 NMUR2Q9GZQ4 415 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 MMADHCQ9H3L0 296 aaPredicted RBP19.58■□□□□ 0.72
CBX1-202ENST00000393408 ARHGEF4Q9NR80 690 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 SMYD2Q9NRG4 433 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 EVPLQ92817 2033 aa19.58■□□□□ 0.72
CBX1-202ENST00000393408 NOP56O00567 594 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms