RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 E5RJQ4 531 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 LYPLA2O95372 231 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 CYP1A2P05177 515 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 URODP06132 367 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 NFIL3Q16649 462 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 C3orf20Q8ND61 904 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 RPL21P46778 160 aaKnown RBP17.16■□□□□ 0.34
SCN3B-202ENST00000392770 FAM71AQ8IYT1 594 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 CARNMT1Q8N4J0 409 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 TTC30BQ8N4P2 665 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 KCNV2Q8TDN2 545 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 E2F7Q96AV8 911 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 YME1L1Q96TA2 773 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 PDGFDQ9GZP0 370 aaPredicted RBP17.16■□□□□ 0.34
SCN3B-202ENST00000392770 B4GALT5O43286 388 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 TMCC1O94876 653 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 TBCCQ15814 346 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 PPP2R3CQ969Q6 453 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 NDE1Q9NXR1 346 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 PCDHGC5Q9Y5F6 944 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 HMGCRP04035 888 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 MLH1P40692 756 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 BLOC1S5Q8TDH9 187 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 PCDH9Q9HC56 1237 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 PCDHB5Q9Y5E4 795 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 CDY2AQ9Y6F7 541 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 MRPS6P82932 125 aaKnown RBP17.16■□□□□ 0.34
SCN3B-202ENST00000392770 AADACL2Q6P093 401 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 IKZF4Q9H2S9 585 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 CD274Q9NZQ7 290 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 SNCAIPQ9Y6H5 919 aa17.16■□□□□ 0.34
SCN3B-202ENST00000392770 INHBEP58166 350 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 RTP1P59025 263 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 AP2B1P63010 937 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 CAPRIN1Q14444 709 aaKnown RBP17.15■□□□□ 0.34
SCN3B-202ENST00000392770 KRT80Q6KB66 452 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 CXCL17Q6UXB2 119 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 MFSD7Q6UXD7 560 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 COLGALT1Q8NBJ5 622 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 PIP4K2CQ8TBX8 421 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 FAM111AQ96PZ2 611 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 SCUBE2Q9NQ36 999 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 GDF3Q9NR23 364 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 TLR8Q9NR97 1041 aaKnown RBP17.15■□□□□ 0.34
SCN3B-202ENST00000392770 PKP3Q9Y446 797 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 CICQ96RK0 1608 aaPredicted RBP17.15■□□□□ 0.34
SCN3B-202ENST00000392770 NCANO14594 1321 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 ASMTLO95671 621 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 FOXD4Q12950 439 aaPredicted RBP17.15■□□□□ 0.34
SCN3B-202ENST00000392770 GTF2H3Q13889 308 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 RASIP1Q5U651 963 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 FOXR2Q6PJQ5 311 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 C5P01031 1676 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 MAMLD1Q13495 774 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 THEMIS2Q5TEJ8 643 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 SZRD1Q7Z422 152 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 INPP4AQ96PE3 977 aaPredicted RBP17.15■□□□□ 0.34
SCN3B-202ENST00000392770 FICDQ9BVA6 458 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 COL20A1Q9P218 1284 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 SCOCQ9UIL1 159 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 HES2Q9Y543 173 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 RCCD1A6NED2 376 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 PTRHD1Q6GMV3 140 aaKnown RBP17.15■□□□□ 0.34
SCN3B-202ENST00000392770 PAFAH2Q99487 392 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 TRPM5Q9NZQ8 1165 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
SCN3B-202ENST00000392770 MYO1DO94832 1006 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 RHOBTB1O94844 696 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 MAP4P27816 1152 aaKnown RBP17.14■□□□□ 0.34
SCN3B-202ENST00000392770 HMOX2P30519 316 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 OXCT1P55809 520 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 YWHAZP63104 245 aaKnown RBP17.14■□□□□ 0.34
SCN3B-202ENST00000392770 FAM171A1Q5VUB5 890 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 DEFB106AQ8N104 65 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 TBCBQ99426 244 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 APBA2Q99767 749 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 UMODL1Q5DID0 1318 aa17.14■□□□□ 0.34
SCN3B-202ENST00000392770 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
SCN3B-202ENST00000392770 CCNJLQ8IV13 435 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 CLEC4DQ8WXI8 215 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 GAD1Q99259 594 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 ADAM2Q99965 735 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 IARS2Q9NSE4 1012 aaKnown RBP17.14■□□□□ 0.33
SCN3B-202ENST00000392770 CDYLQ9Y232 598 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 MTO1Q9Y2Z2 717 aaKnown RBP17.14■□□□□ 0.33
SCN3B-202ENST00000392770 MIPP30301 263 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 PGM1P36871 562 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 ZNF280AP59817 542 aaPredicted RBP17.14■□□□□ 0.33
SCN3B-202ENST00000392770 NFE2Q16621 373 aaPredicted RBP17.14■□□□□ 0.33
SCN3B-202ENST00000392770 GPR20Q99678 358 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 HMX1Q9NP08 348 aaPredicted RBP17.14■□□□□ 0.33
SCN3B-202ENST00000392770 F8VP50 259 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 FAM107AO95990 144 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 HIST1H2AGP0C0S8 130 aaPredicted RBP17.14■□□□□ 0.33
SCN3B-202ENST00000392770 HIST1H2ADP20671 130 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 FKBP1BP68106 108 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 TRPM8Q7Z2W7 1104 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 OR5B17Q8NGF7 314 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 PPTC7Q8NI37 304 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 HIST1H2AHQ96KK5 128 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms