RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 MDH1P40925 334 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 EIF3EP60228 445 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 MAGOHP61326 146 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 NOMO1Q15155 1222 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 RAB6CQ53S08 254 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 RNASEH2BQ5TBB1 312 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 SCYL2Q6P3W7 929 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 PRUNE1Q86TP1 453 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 RSAD2Q8WXG1 361 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 LPPQ93052 612 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 ARMC5Q96C12 935 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 ZNF333Q96JL9 665 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 ZNF670Q9BS34 389 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 PHACTR1Q9C0D0 580 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 RAB6CQ9H0N0 254 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 CNOT10Q9H9A5 744 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 LRRC4CQ9HCJ2 640 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 PCDH18Q9HCL0 1135 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 UBN1Q9NPG3 1134 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 MIOSQ9NXC5 875 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 NINJ2Q9NZG7 142 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 SAE1Q9UBE0 346 aaPredicted RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 SLC12A6Q9UHW9 1150 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 A0A0U1RQF3 1178 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 SMAPO00193 183 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 SCNN1GP51170 649 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 CLCNKBP51801 687 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 ITGA7Q13683 1181 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 LPIN1Q14693 890 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 TRIM71Q2Q1W2 868 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 TNFAIP8L3Q5GJ75 292 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 UBAP2Q5T6F2 1119 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 STRADAQ7RTN6 431 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 PIGZQ86VD9 579 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 CLEC4CQ8WTT0 213 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 FAF2Q96CS3 445 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 PGBD4Q96DM1 585 aa20.94■□□□□ 0.94
PTPN11-202ENST00000392597 RBM15Q96T37 977 aaKnown RBP eCLIP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 SNRNP25Q9BV90 132 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 PAK6Q9NQU5 681 aaPredicted RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 DDX43Q9NXZ2 648 aaKnown RBP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.94■□□□□ 0.94
PTPN11-202ENST00000392597 ATP2C2O75185 946 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 ACSL3O95573 720 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 IFNB1P01574 187 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 ABHD2P08910 425 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 GHRP10912 638 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 ETS1P14921 441 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 PECAM1P16284 738 aaPredicted RBP20.93■□□□□ 0.94
PTPN11-202ENST00000392597 TGM2P21980 687 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 STIP1P31948 543 aaKnown RBP20.93■□□□□ 0.94
PTPN11-202ENST00000392597 CDR1P51861 262 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 MMRN1Q13201 1228 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 PAQR9Q6ZVX9 377 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.93■□□□□ 0.94
PTPN11-202ENST00000392597 P3H4Q92791 437 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 SERPINB12Q96P63 405 aa20.93■□□□□ 0.94
PTPN11-202ENST00000392597 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.93■□□□□ 0.94
PTPN11-202ENST00000392597 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
PTPN11-202ENST00000392597 IL4RP24394 825 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 MATKP42679 507 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 AFF1P51825 1210 aaKnown RBP20.92■□□□□ 0.94
PTPN11-202ENST00000392597 DPYSL2Q16555 572 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 UPP1Q16831 310 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 ERMARDQ5T6L9 678 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 TTC25Q96NG3 672 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 NOD1Q9Y239 953 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 FARP1Q9Y4F1 1045 aaPredicted RBP20.92■□□□□ 0.94
PTPN11-202ENST00000392597 TLDC2A0PJX2 215 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 MGEA5O60502 916 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 RBP3P10745 1247 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 ACAT1P24752 427 aaKnown RBP20.92■□□□□ 0.94
PTPN11-202ENST00000392597 MAGEA4P43358 317 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 ACLYP53396 1101 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 ROR1Q01973 937 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 MTFR1Q15390 333 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 KYNUQ16719 465 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 CCDC142Q17RM4 750 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 ANKRD20A8PQ5CZ79 823 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 MDH1BQ5I0G3 518 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 SLC9A4Q6AI14 798 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 DSTYKQ6XUX3 929 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 SYT15Q9BQS2 421 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 UNC93B1Q9H1C4 597 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 CDH9Q9ULB4 789 aa20.92■□□□□ 0.94
PTPN11-202ENST00000392597 DCDC2CA8MYV0 355 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 APOL1O14791 398 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 DAB1O75553 588 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 FAM200BP0CF97 657 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 LSP1P33241 339 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 MRPS5P82675 430 aaKnown RBP20.91■□□□□ 0.94
PTPN11-202ENST00000392597 ADCY1Q08828 1119 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 ADIGQ0VDE8 80 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 AUHQ13825 339 aaKnown RBP20.91■□□□□ 0.94
PTPN11-202ENST00000392597 ZC3H12AQ5D1E8 599 aaKnown RBP20.91■□□□□ 0.94
PTPN11-202ENST00000392597 CLEC20AQ6ZU45 233 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 PPIL6Q8IXY8 311 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 PLD5Q8N7P1 536 aa20.91■□□□□ 0.94
PTPN11-202ENST00000392597 UHMK1Q8TAS1 419 aaKnown RBP20.91■□□□□ 0.94
PTPN11-202ENST00000392597 EPS8L3Q8TE67 593 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms