RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 ARHGAP24Q8N264 748 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 ZNF483Q8TF39 744 aaPredicted RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 THTPAQ9BU02 230 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 TRIM4Q9C037 500 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 CDT1Q9H211 546 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 PAPOLBQ9NRJ5 636 aaKnown RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 SLC24A2Q9UI40 661 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 HEY1Q9Y5J3 304 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 PAPPA2Q9BXP8 1791 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 GPR25O00155 361 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 ACKR2O00590 384 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 ALOX15BO15296 676 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 AVILO75366 819 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 AP1G2O75843 785 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 ITGB3P05106 788 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 LINGO3P0C6S8 592 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 RBP3P10745 1247 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 KRT3P12035 628 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 PSMC1P62191 440 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 ARHGAP1Q07960 439 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 GRM1Q13255 1194 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 WASHC2DQ5SRD0 308 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 C1orf228Q6PIY5 440 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 BRI3BPQ8WY22 251 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 LENG1Q96BZ8 264 aaPredicted RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 FAF2Q96CS3 445 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 ACAP3Q96P50 834 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 SHCBP1LQ9BZQ2 653 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 NIF3L1Q9GZT8 377 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 H3BRB1 525 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 TXNDC9O14530 226 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 LGR5O75473 907 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 ELK3P41970 407 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 PHKA2P46019 1235 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 TUBP50607 506 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 KIZQ2M2Z5 673 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 C4orf50Q6ZRC1 276 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.29□□□□□ -0.69e-7■■■■■ 51.2
BRF1-204ENST00000392557 SPATA18Q8TC71 538 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 PTPRN2Q92932 1015 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 SH3GL3Q99963 347 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 SYT15Q9BQS2 421 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 MECRQ9BV79 373 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 TUT1Q9H6E5 874 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 CPA4Q9UI42 421 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 C2CD2LO14523 706 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 WFS1O76024 890 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 RNF8O76064 485 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 CYP1A1P04798 512 aaPredicted RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 GPX6P59796 221 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 BMPR2Q13873 1038 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 SGSM1Q2NKQ1 1148 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 KBTBD12Q3ZCT8 623 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 RNASEH2BQ5TBB1 312 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 C1orf146Q5VVC0 180 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 CASC4Q6P4E1 433 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 PCGF5Q86SE9 256 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 DENND1AQ8TEH3 1009 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 PCDH9Q9HC56 1237 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 CPSF3Q9UKF6 684 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 SHOC2Q9UQ13 582 aa11.29□□□□□ -0.6
BRF1-204ENST00000392557 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
BRF1-204ENST00000392557 TCRBV7S3A2A0A539 114 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 LACTBL1A8MY62 500 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 FCHO1O14526 889 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 DYNC1LI2O43237 492 aaPredicted RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 FAM155BO75949 473 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 STAG3L1P0CL83 205 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 CLDN10P78369 228 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 ZNF200P98182 395 aaPredicted RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 RASA2Q15283 850 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 OR6J1Q8NGC5 347 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 CCDC124Q96CT7 223 aaKnown RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 MIPEPQ99797 713 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 SETD4Q9NVD3 440 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 hCG_1818297A0A087WSY0 165 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 TRIM49D1C9J1S8 452 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 GSC2O15499 205 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 GRAP2O75791 330 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 C22orf31O95567 290 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 HOXC6P09630 235 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 RFC1P35251 1148 aaPredicted RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 MBTD1Q05BQ5 628 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 MCL1Q07820 350 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 ACSBG2Q5FVE4 666 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms