RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 STX1BP61266 288 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
SNX9-201ENST00000392185 E2F5Q15329 346 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 PTPRN2Q92932 1015 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 DEFB118Q96PH6 123 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 LMCD1Q9NZU5 365 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 RAB21Q9UL25 225 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 IPPQ9Y573 584 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 TRIM49D1C9J1S8 452 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 RAD51Q06609 339 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 HABP4Q5JVS0 413 aaKnown RBP17.12■□□□□ 0.33
SNX9-201ENST00000392185 PPP1R26Q5T8A7 1209 aaPredicted RBP17.12■□□□□ 0.33
SNX9-201ENST00000392185 CDC26Q8NHZ8 85 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 MRPL45Q9BRJ2 306 aaKnown RBP17.12■□□□□ 0.33
SNX9-201ENST00000392185 B3GNT5Q9BYG0 378 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
SNX9-201ENST00000392185 SENP1Q9P0U3 644 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 RPTORQ8N122 1335 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 SMIM28A0A1B0GU29 152 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 E5RI56 91 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 HOXA2O43364 376 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 CYBBP04839 570 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 OCRLQ01968 901 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 USP10Q14694 798 aaKnown RBP17.12■□□□□ 0.33
SNX9-201ENST00000392185 TSHZ1Q6ZSZ6 1077 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 FAM183BPQ6ZVS7 135 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 LRRC6Q86X45 466 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 NETO2Q8NC67 525 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 B3GALNT2Q8NCR0 500 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 SMARCD1Q96GM5 515 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 KANSL3Q9P2N6 904 aa17.12■□□□□ 0.33
SNX9-201ENST00000392185 B4GALT4O60513 344 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 CYP1A2P05177 515 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 URODP06132 367 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 MYBL2P10244 700 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 TAS2R40P59535 323 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 TTC30AQ86WT1 665 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 TMEM192Q8IY95 271 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 PPHLN1Q8NEY8 458 aaKnown RBP17.11■□□□□ 0.33
SNX9-201ENST00000392185 JOSD2Q8TAC2 188 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 XPO6Q96QU8 1125 aaKnown RBP17.11■□□□□ 0.33
SNX9-201ENST00000392185 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 SMIM35A0A1B0GVV1 85 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 FAM47DPA6NHR8 397 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 SIGLEC16A6NMB1 481 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 ATP6V0D2Q8N8Y2 350 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 HIPK4Q8NE63 616 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 GIPC2Q8TF65 315 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 PPP1R36Q96LQ0 422 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 TELO2Q9Y4R8 837 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 LTFP02788 710 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 POLBP06746 335 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 ETS1P14921 441 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 TAC1P20366 129 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 KCNA10Q16322 511 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 PTPN20Q4JDL3 420 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 PCDHB5Q9Y5E4 795 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 C10orf71Q711Q0 1435 aa17.11■□□□□ 0.33
SNX9-201ENST00000392185 ARFIP2P53365 341 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 AMPD2Q01433 879 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 TRADDQ15628 312 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 SDHAF4Q5VUM1 108 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 PRELID2Q8N945 189 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 TSEN2Q8NCE0 465 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 RSRC1Q96IZ7 334 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 MINDY3Q9H8M7 445 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 NDFIP2Q9NV92 336 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 FGFR1OP2Q9NVK5 253 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 WHRNQ9P202 907 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 MYH3P11055 1940 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 TSPAN1O60635 241 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 LRG1P02750 347 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 PECAM1P16284 738 aaPredicted RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 PPARGP37231 505 aaPredicted RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 RPL10AP62906 217 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 PRKCZQ05513 592 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 ARHGAP1Q07960 439 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 LRRC37BQ96QE4 947 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 DDX23Q9BUQ8 820 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 DUSP11O75319 330 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 SNRPAP09012 282 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 NOVP48745 357 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 MMRN1Q13201 1228 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 RBBP5Q15291 538 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 AGBL2Q5U5Z8 902 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 UNC93AQ86WB7 457 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 APOBEC3GQ9HC16 384 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 TRPM5Q9NZQ8 1165 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 AFF4Q9UHB7 1163 aaKnown RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 C22orf31O95567 290 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 HOXD13P35453 343 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 MBTD1Q05BQ5 628 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 KCNT2Q6UVM3 1135 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 ROPN1BQ9BZX4 212 aaPredicted RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 ROPN1Q9HAT0 212 aaPredicted RBP17.1■□□□□ 0.33
SNX9-201ENST00000392185 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
SNX9-201ENST00000392185 BTAF1O14981 1849 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 EIF3HO15372 352 aaKnown RBP eCLIP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms