RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 LIN7AO14910 233 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 ATP6V1C1P21283 382 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 TYW3Q6IPR3 259 aaKnown RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 CRELD2Q6UXH1 353 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 TTC39CQ8N584 583 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 EHD3Q9NZN3 535 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 RSL24D1Q9UHA3 163 aaKnown RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 PTPAQ15257 358 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 TFDP3Q5H9I0 405 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 N4BP2L1Q5TBK1 243 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 TWF2Q6IBS0 349 aaKnown RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 CDRT15Q96T59 188 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 KRT6AP02538 564 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 CDH3P22223 829 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 TALDO1P37837 337 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 SWT1Q5T5J6 900 aaKnown RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 RC3H1Q5TC82 1133 aaKnown RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 ZFP1Q6P2D0 407 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 ZFP42Q96MM3 310 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 RMND5AQ9H871 391 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 PNMA8BQ9ULN7 279 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-204ENST00000391814 CPSF4O95639 269 aaKnown RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 FEN1P39748 380 aaKnown RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 CRKP46108 304 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 RPS7P62081 194 aaKnown RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 RAD51Q06609 339 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ZRANB3Q5FWF4 1079 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 FAM45BPQ6NSW5 357 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 SLC26A11Q86WA9 606 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 SLC7A14Q8TBB6 771 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 PABPC5Q96DU9 382 aaKnown RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 APOPT1Q96IL0 206 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ABCB10Q9NRK6 738 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 DUSP12Q9UNI6 340 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 PROCP04070 461 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 NT5C2P49902 561 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 PKNOX1P55347 436 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 CHMP1BQ7LBR1 199 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 TCF7L2Q9NQB0 619 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 LATS2Q9NRM7 1088 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 RPS6KL1Q9Y6S9 549 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ATG7O95352 703 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ALOX15P16050 662 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 CHRM3P20309 590 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 MAGEA10P43363 369 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ZCCHC23Q6ZST2 131 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 TATDN2Q93075 761 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 EFCAB10A6NFE3 127 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 FAM228AQ86W67 206 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 MYO5CQ9NQX4 1742 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 A0A0A6YYK5 440 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 FOXN3O00409 490 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 INPP4BO15327 924 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 EIF2S1P05198 315 aaKnown RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 PDGFRBP09619 1106 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 PRIM2P49643 509 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 HK2P52789 917 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ATP12AP54707 1039 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 FAM98BQ52LJ0 330 aaKnown RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 PTRHD1Q6GMV3 140 aaKnown RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 FOXP4Q8IVH2 680 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 EID3Q8N140 333 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ZSWIM2Q8NEG5 633 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 APOL4Q9BPW4 351 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 CHST12Q9NRB3 414 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ZNF624Q9P2J8 865 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-204ENST00000391814 CNTNAP5Q8WYK1 1306 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 TK2O00142 265 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 ENTPD5O75356 428 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 SOAT2O75908 522 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 GALK1P51570 392 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 C11orf96Q7Z7L8 435 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 POLR1BQ9H9Y6 1135 aa16.65■□□□□ 0.26
SHANK1-204ENST00000391814 VWA5AO00534 786 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 UBDO15205 165 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 FLT3P36888 993 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 NCALDP61601 193 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 DDR1Q08345 913 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 RNF43Q68DV7 783 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 SNRNP48Q6IEG0 339 aaKnown RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 UTP15Q8TED0 518 aaKnown RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 MTMR8Q96EF0 704 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 FHDC1Q9C0D6 1143 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 CAPN10Q9HC96 672 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 PTPRHQ9HD43 1115 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 PNPLA7Q6ZV29 1317 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 SPANXN2Q5MJ10 180 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 EFHBQ8N7U6 833 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 ANKRD49Q8WVL7 239 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 POLG2Q9UHN1 485 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 HBS1LQ9Y450 684 aaKnown RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 SEMA3DO95025 777 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 HMBSP08397 361 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 GRAPQ13588 217 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 CLEC16AQ2KHT3 1053 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms