RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 GAD2Q05329 585 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 VSTM1Q6UX27 236 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
SOD1-202ENST00000389995 HS2ST1Q7LGA3 356 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 ZNF720Q7Z2F6 126 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 NT5DC4Q86YG4 428 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 CHPFQ8IZ52 775 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 KCTD17Q8N5Z5 321 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 TERB1Q8NA31 727 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 OR5B17Q8NGF7 314 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
SOD1-202ENST00000389995 CACTINQ8WUQ7 758 aaKnown RBP12.57□□□□□ -0.4
SOD1-202ENST00000389995 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 ZNF419Q96HQ0 510 aaPredicted RBP12.57□□□□□ -0.4
SOD1-202ENST00000389995 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
SOD1-202ENST00000389995 MIR1-1HGQ9H1L0 117 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 TOR4AQ9NXH8 423 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 DEC1Q9P2X7 70 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 ITGA11Q9UKX5 1188 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 CKAP5Q14008 2032 aa12.57□□□□□ -0.4
SOD1-202ENST00000389995 TRABD2BA6NFA1 517 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 CLDN5O00501 218 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 COCHO43405 550 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 PFKLP17858 780 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 SCP2P22307 547 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 UBA7P41226 1012 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 CCDC157Q569K6 752 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 BTBD8Q5XKL5 378 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 ZCCHC9Q8N567 271 aaKnown RBP12.56□□□□□ -0.4
SOD1-202ENST00000389995 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 HPDLQ96IR7 371 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 DCBLD2Q96PD2 775 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 MRPL45Q9BRJ2 306 aaKnown RBP12.56□□□□□ -0.4
SOD1-202ENST00000389995 CBWD1Q9BRT8 395 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 DPEP3Q9H4B8 488 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 CCSER2Q9H7U1 834 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 CACNA2D2Q9NY47 1150 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
SOD1-202ENST00000389995 FNDC3AQ9Y2H6 1198 aaKnown RBP12.56□□□□□ -0.4
SOD1-202ENST00000389995 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
SOD1-202ENST00000389995 E2F8A0AVK6 867 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 PRRT4C9JH25 899 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 TRIM66O15016 1216 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 HOXC11O43248 304 aaPredicted RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 ZNF217O75362 1048 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 PPP1R37O75864 691 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 C1QL1O75973 258 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 TMEM191BP0C7N4 346 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 GNSP15586 552 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 CASP5P51878 434 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 BNC1Q01954 994 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 POSTNQ15063 836 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 RILPL1Q5EBL4 403 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 SYCP2LQ5T4T6 812 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 TDRD10Q5VZ19 366 aaKnown RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 TMPRSS7Q7RTY8 843 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 TRMT11Q7Z4G4 463 aaKnown RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 LIMS2Q7Z4I7 341 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 GLRX5Q86SX6 157 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 PIP4K2CQ8TBX8 421 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 MYCBPAPQ8TBZ2 947 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 MRGPRX1Q96LB2 322 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 MMS19Q96T76 1030 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 ZNF518BQ9C0D4 1074 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 ST6GALNAC4Q9H4F1 302 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 FAM124BQ9H5Z6 455 aaPredicted RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 MRPL44Q9H9J2 332 aaKnown RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 SPHK2Q9NRA0 654 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 DNAJC17Q9NVM6 304 aaKnown RBP12.55□□□□□ -0.4
SOD1-202ENST00000389995 TBC1D14Q9P2M4 693 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 BTBD3Q9Y2F9 522 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 PLXNA2O75051 1894 aa12.55□□□□□ -0.4
SOD1-202ENST00000389995 HECTD1Q9ULT8 2610 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 MEI4A8MW99 385 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 NEDD8-MDP1E9PL57 170 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 PPP3CCP48454 512 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 PGFP49763 221 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
SOD1-202ENST00000389995 GRAMD4Q6IC98 578 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
SOD1-202ENST00000389995 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
SOD1-202ENST00000389995 BHMTQ93088 406 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 TOE1Q96GM8 510 aaKnown RBP12.54□□□□□ -0.4
SOD1-202ENST00000389995 C8orf48Q96LL4 319 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 SLITRK1Q96PX8 696 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 STRA6Q9BX79 667 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 GPR174Q9BXC1 333 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms