RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SCP2P22307 547 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 EIF2S3P41091 472 aaKnown RBP10.27□□□□□ -0.77
IFT88-203ENST00000389373 RBP5P82980 135 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 MCM6Q14566 821 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 SUZ12Q15022 739 aaKnown RBP10.27□□□□□ -0.77
IFT88-203ENST00000389373 POSTNQ15063 836 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 TMEM119Q4V9L6 283 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 MDH1BQ5I0G3 518 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 DCAF12L1Q5VU92 463 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 IL27RAQ6UWB1 636 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 DHRS13Q6UX07 377 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 TPGS1Q6ZTW0 290 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 ZNF843Q8N446 348 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 TOP6BLQ8N6T0 577 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 LRRC52Q8N7C0 313 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 KIAA1958Q8N8K9 716 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 ZSWIM2Q8NEG5 633 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 SNX19Q92543 992 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 MRGPRX1Q96LB2 322 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 MMS19Q96T76 1030 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.27□□□□□ -0.77
IFT88-203ENST00000389373 GDAP2Q9NXN4 497 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 ANAPC1Q9H1A4 1944 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 FREM2Q5SZK8 3169 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 URB1O60287 2271 aaKnown RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 PRRT4C9JH25 899 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 NEDD8-MDP1E9PL57 170 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 J3QKU1 62 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 KCNK3O14649 394 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 BCAT2O15382 392 aaPredicted RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 HOXC11O43248 304 aaPredicted RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 COCHO43405 550 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 OLFM2O95897 454 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 ABCD1P33897 745 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 ANAPC15P60006 121 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 BNC1Q01954 994 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 SEMG2Q02383 582 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 MYO1EQ12965 1108 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 MAPRE1Q15691 268 aaKnown RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 MCTP1Q6DN14 999 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 KCTD17Q8N5Z5 321 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 BAHD1Q8TBE0 780 aaPredicted RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 DNASE2BQ8WZ79 361 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 KCNN1Q92952 543 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 BHMTQ93088 406 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 FBXO32Q969P5 355 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 WBP2Q969T9 261 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 OTUB2Q96DC9 234 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 CALML4Q96GE6 196 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 PCED1BQ96HM7 432 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 FCRL3Q96P31 734 aaPredicted RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 XPO6Q96QU8 1125 aaKnown RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 FIZ1Q96SL8 496 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 ARID3AQ99856 593 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 TTLL2Q9BWV7 592 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 NACA2Q9H009 215 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 PRORYQ9H606 182 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 WSB2Q9NYS7 404 aaPredicted RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 RBAKQ9NYW8 714 aaPredicted RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 EIF2B4Q9UI10 523 aaKnown RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 ITGA11Q9UKX5 1188 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 STARD13Q9Y3M8 1113 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 STYXL1Q9Y6J8 313 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 AK5Q9Y6K8 562 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 ITPR1Q14643 2758 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 HELZP42694 1942 aaKnown RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 PLXND1Q9Y4D7 1925 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 PTPRBP23467 1997 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 SHROOM3Q8TF72 1996 aa10.26□□□□□ -0.77
IFT88-203ENST00000389373 SETXQ7Z333 2677 aaKnown RBP10.26□□□□□ -0.77
IFT88-203ENST00000389373 CLDN5O00501 218 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 RRP8O43159 456 aaKnown RBP10.25□□□□□ -0.77
IFT88-203ENST00000389373 TNFSF14O43557 240 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 ZNF883P0CG24 379 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 JUPP14923 745 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 YWHAQP27348 245 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 ADSSP30520 456 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 CSNK1EP49674 416 aaKnown RBP10.25□□□□□ -0.77
IFT88-203ENST00000389373 ZNF131P52739 623 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 CLDN6P56747 220 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 NOP14P78316 857 aaKnown RBP10.25□□□□□ -0.77
IFT88-203ENST00000389373 POU5F1Q01860 360 aaKnown RBP10.25□□□□□ -0.77
IFT88-203ENST00000389373 CFHR1Q03591 330 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 HECTD3Q5T447 861 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 CACUL1Q86Y37 369 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 BRSK2Q8IWQ3 736 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 MYCBPAPQ8TBZ2 947 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 KBTBD7Q8WVZ9 684 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 HPDLQ96IR7 371 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 ANKRD36BP1Q96IX9 119 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 C8orf48Q96LL4 319 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 BBS2Q9BXC9 721 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 MTMR12Q9C0I1 747 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 SNX25Q9H3E2 840 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 PCIF1Q9H4Z3 704 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 CCSER2Q9H7U1 834 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 PDE11AQ9HCR9 933 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 TBC1D7Q9P0N9 293 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms