RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 PMPCBO75439 489 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 FGF18O76093 207 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 VNN1O95497 513 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 HARSP12081 509 aaKnown RBP3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 JUPP14923 745 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 CREB1P16220 341 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 PCSK6P29122 969 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 CTGFP29279 349 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 ATICP31939 592 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 ALDH5A1P51649 535 aaPredicted RBP3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 UBE4AQ14139 1066 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 KCNAB1Q14722 419 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 C4orf46Q504U0 113 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 MANEALQ5VSG8 457 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 HIBCHQ6NVY1 386 aaPredicted RBP3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 CLEC9AQ6UXN8 241 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 TRIM72Q6ZMU5 477 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 PTCHD4Q6ZW05 846 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 PTF1AQ7RTS3 328 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 TTC30AQ86WT1 665 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 SFTPA1Q8IWL2 248 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 RNF152Q8N8N0 203 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 MBD3L2Q8NHZ7 208 aaPredicted RBP3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 BBC3Q96PG8 261 aaPredicted RBP3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 SELENOOQ9BVL4 669 aa3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 ARPP21Q9UBL0 812 aaPredicted RBP3.92□□□□□ -1.78
RNU6-39P-201ENST00000384344 A8MVJ9 347 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 TARM1B6A8C7 271 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 UBE2Q2LH0YL09 131 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 ERBB2P04626 1255 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 ELFN1P0C7U0 828 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 TMEM225BP0DP42 221 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 EEF1GP26641 437 aaKnown RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 CD38P28907 300 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 SLC5A2P31639 672 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 CLK3P49761 638 aaKnown RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 NANOS3P60323 173 aaKnown RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 EIF4A1P60842 406 aaKnown RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 TXNL4AP83876 142 aaKnown RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 HOXA4Q00056 320 aaPredicted RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 CYP1B1Q16678 543 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 CERKLQ49MI3 558 aaPredicted RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 SYCP2LQ5T4T6 812 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 FCRLBQ6BAA4 426 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 CRTC1Q6UUV9 634 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 SERPINA13PQ6UXR4 307 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 NAPRTQ6XQN6 538 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 DPY19L3Q6ZPD9 716 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 PRIMA1Q86XR5 153 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 ZNF384Q8TF68 577 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 GRAMD1AQ96CP6 724 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 FYTTD1Q96QD9 318 aaKnown RBP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 PRR25Q96S07 402 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 TM7SF3Q9NS93 570 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 PTGFRNQ9P2B2 879 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 MGAT4CQ9UBM8 478 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 MAN2B2Q9Y2E5 1009 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 COX11Q9Y6N1 276 aa3.91□□□□□ -1.78
RNU6-39P-201ENST00000384344 H7C1Q1 480 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 PODXLO00592 558 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 NCK2O43639 380 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 EXOC3O60645 756 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 VIPP01282 170 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 FGAP02671 866 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 ZNF37AP17032 561 aaPredicted RBP3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 ADRA1DP25100 572 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 YY1P25490 414 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 ITPKBP27987 946 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 TECP42680 631 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 DGKQP52824 942 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 STARD3Q14849 445 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 SLC35G1Q2M3R5 365 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 DGKKQ5KSL6 1271 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 ZNF362Q5T0B9 420 aaPredicted RBP3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 ARL6IP4Q66PJ3 421 aaKnown RBP3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 P3H2Q8IVL5 708 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 SYTL1Q8IYJ3 562 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 SAMD3Q8N6K7 520 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 C11orf44Q8N8P7 122 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 TERB1Q8NA31 727 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 HASPINQ8TF76 798 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 SGCZQ96LD1 299 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 HS6ST2Q96MM7 605 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 SNX18Q96RF0 628 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 EIF3CQ99613 913 aaKnown RBP3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 CINPQ9BW66 212 aaPredicted RBP3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 CIPCQ9C0C6 399 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 PCDHAC1Q9H158 963 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 R3HDMLQ9H3Y0 253 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 VPS51Q9UID3 782 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 RIMKLBQ9ULI2 386 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 MAGED2Q9UNF1 606 aaPredicted RBP3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 LRCH1Q9Y2L9 728 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 SLC27A6Q9Y2P4 619 aa3.9□□□□□ -1.79
RNU6-39P-201ENST00000384344 SMIM22K7EJ46 135 aa3.89□□□□□ -1.79
RNU6-39P-201ENST00000384344 ZSCAN9O15535 394 aaPredicted RBP3.89□□□□□ -1.79
RNU6-39P-201ENST00000384344 KCNQ3O43525 872 aa3.89□□□□□ -1.79
RNU6-39P-201ENST00000384344 GCATO75600 419 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms