RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 TSTD1Q8NFU3 115 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 TCEAL3Q969E4 200 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 CCDC47Q96A33 483 aaKnown RBP14.98□□□□□ -0.01
SHOX-202ENST00000381575 RTKNQ9BST9 563 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 TRAF3IP3Q9Y228 551 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 GTF3C3Q9Y5Q9 886 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 SLC9A3R1O14745 358 aaPredicted RBP14.98□□□□□ -0.01
SHOX-202ENST00000381575 SLC30A4O14863 429 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 CYP26A1O43174 497 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 KLF8O95600 359 aaPredicted RBP14.98□□□□□ -0.01
SHOX-202ENST00000381575 TBX18O95935 607 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 MYL1P05976 194 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 TMEM92Q6UXU6 159 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 CRYBG2Q8N1P7 616 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 TMEM174Q8WUU8 243 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 OVCA2Q8WZ82 227 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 NACA2Q9H009 215 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 DUSP15Q9H1R2 295 aaPredicted RBP14.98□□□□□ -0.01
SHOX-202ENST00000381575 OSER1Q9NX31 292 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 IL37Q9NZH6 218 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 NUDT5Q9UKK9 219 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 SH3BP1Q9Y3L3 701 aa14.98□□□□□ -0.01
SHOX-202ENST00000381575 E2F8A0AVK6 867 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 IKBKBO14920 756 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 MDM4O15151 490 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 TRIM24O15164 1050 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 TLR5O60602 858 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 ZNF202O95125 648 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 KAT7O95251 611 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 ADH1CP00326 375 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 ZDHHC11BP0C7U3 371 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 FAM200BP0CF97 657 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 KRT13P13646 458 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 BCKDHBP21953 392 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 GBP1P32455 592 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 MPLP40238 635 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 PNOCQ13519 176 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 CLEC20AQ6ZU45 233 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 DDX42Q86XP3 938 aaKnown RBP eCLIP14.97□□□□□ -0.01
SHOX-202ENST00000381575 GUF1Q8N442 669 aaKnown RBP14.97□□□□□ -0.01
SHOX-202ENST00000381575 C12orf50Q8NA57 414 aaPredicted RBP14.97□□□□□ -0.01
SHOX-202ENST00000381575 TXNDC5Q8NBS9 432 aaKnown RBP14.97□□□□□ -0.01
SHOX-202ENST00000381575 TAF4BQ92750 862 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 PNKPQ96T60 521 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 IMPG2Q9BZV3 1241 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 ARHGEF4Q9NR80 690 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 MMP17Q9ULZ9 603 aa14.97□□□□□ -0.01
SHOX-202ENST00000381575 TNRC6BQ9UPQ9 1833 aaKnown RBP14.96□□□□□ -0.01
SHOX-202ENST00000381575 ASCC3Q8N3C0 2202 aaKnown RBP14.96□□□□□ -0.01
SHOX-202ENST00000381575 PLXND1Q9Y4D7 1925 aa14.96□□□□□ -0.01
SHOX-202ENST00000381575 FRYQ5TBA9 3013 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 A0A1W2PQ27 194 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 A0A1W2PQ64 194 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 A0A1W2PQD8 194 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 FAM92AA1XBS5 289 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 HHLA1C9JL84 531 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 SGK1O00141 431 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 KIF20AO95235 890 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 APODP05090 189 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 CHRM1P11229 460 aaPredicted RBP14.96□□□□□ -0.02
SHOX-202ENST00000381575 INCA1Q0VD86 236 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 ADAM9Q13443 819 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 ZCWPW2Q504Y3 356 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 ZNF394Q53GI3 561 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 PPM1JQ5JR12 505 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 SNX30Q5VWJ9 437 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 INTS8Q75QN2 995 aaKnown RBP14.96□□□□□ -0.02
SHOX-202ENST00000381575 UNC93AQ86WB7 457 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 TMEM25Q86YD3 366 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 IL17RCQ8NAC3 791 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 MDGA1Q8NFP4 955 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 WHAMMQ8TF30 809 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 SEMA4DQ92854 862 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 ERCC4Q92889 916 aaPredicted RBP14.96□□□□□ -0.02
SHOX-202ENST00000381575 ERLEC1Q96DZ1 483 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 CYFIP2Q96F07 1278 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 NIF3L1Q9GZT8 377 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 SCAND2PQ9GZW5 306 aaPredicted RBP14.96□□□□□ -0.02
SHOX-202ENST00000381575 CSNK1G1Q9HCP0 422 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 EBF1Q9UH73 591 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.02
SHOX-202ENST00000381575 ADAMTS9Q9P2N4 1935 aa14.96□□□□□ -0.02
SHOX-202ENST00000381575 A0A1W2PQH9 124 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 MAPK13O15264 365 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 ZNF806P0C7X5 589 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 ACO1P21399 889 aaKnown RBP14.95□□□□□ -0.02
SHOX-202ENST00000381575 PSMC2P35998 433 aaKnown RBP14.95□□□□□ -0.02
SHOX-202ENST00000381575 CREB5Q02930 508 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 ELF2Q15723 593 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 NFIL3Q16649 462 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 ANO4Q32M45 955 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 PHTF2Q8N3S3 785 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 RLN3Q8WXF3 142 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 LOXL4Q96JB6 756 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 ZC3H10Q96K80 434 aaKnown RBP14.95□□□□□ -0.02
SHOX-202ENST00000381575 HNRNPABQ99729 332 aaKnown RBP14.95□□□□□ -0.02
SHOX-202ENST00000381575 ARID3AQ99856 593 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 NT5C1AQ9BXI3 368 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 NMUR1Q9HB89 426 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 TLR8Q9NR97 1041 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms