RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SLC2A14Q8TDB8 520 aa17.86■□□□□ 0.45
SMN2-201ENST00000380741 TMC2Q8TDI7 906 aa17.86■□□□□ 0.45
SMN2-201ENST00000380741 CHAMP1Q96JM3 812 aa17.86■□□□□ 0.45
SMN2-201ENST00000380741 SMOQ99835 787 aa17.86■□□□□ 0.45
SMN2-201ENST00000380741 ARHGEF4Q9NR80 690 aa17.86■□□□□ 0.45
SMN2-201ENST00000380741 COMMD8Q9NX08 183 aa17.86■□□□□ 0.45
SMN2-201ENST00000380741 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
SMN2-201ENST00000380741 MAP1BP46821 2468 aaKnown RBP17.86■□□□□ 0.45
SMN2-201ENST00000380741 BCLAF3A2AJT9 711 aaKnown RBP17.85■□□□□ 0.45
SMN2-201ENST00000380741 KLF8O95600 359 aaPredicted RBP17.85■□□□□ 0.45
SMN2-201ENST00000380741 APODP05090 189 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 MYL1P05976 194 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 TIE1P35590 1138 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 PGFP49763 221 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 MAP3K7CLP57077 242 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 EMC10Q5UCC4 262 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 PMS2CLQ68D20 193 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 TTC30AQ86WT1 665 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 CRYBG2Q8N1P7 616 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 PHTF2Q8N3S3 785 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 C12orf29Q8N999 325 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 IL17RCQ8NAC3 791 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 TAF4BQ92750 862 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 WBP2Q969T9 261 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 OTUB2Q96DC9 234 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 CSNK1G1Q9HCP0 422 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 ZDHHC4Q9NPG8 344 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMN2-201ENST00000380741 FAM49BQ9NUQ9 324 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 FRMD4BQ9Y2L6 1034 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 SH3BP1Q9Y3L3 701 aa17.85■□□□□ 0.45
SMN2-201ENST00000380741 KMT2BQ9UMN6 2715 aaPredicted RBP17.85■□□□□ 0.45
SMN2-201ENST00000380741 A0A0A0MRY4 1105 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 SGK1O00141 431 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 IKBKBO14920 756 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 CALUO43852 315 aaPredicted RBP17.84■□□□□ 0.45
SMN2-201ENST00000380741 CAVIN2O95810 425 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 HLA-DRAP01903 254 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 PRR29P0C7W0 189 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 IRF1P10914 325 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 BCKDHBP21953 392 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 GRIA2P42262 883 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 PIK3CAP42336 1068 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 GAD2Q05329 585 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 RNF43Q68DV7 783 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 C11orf74Q86VG3 221 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 UNC93AQ86WB7 457 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 BBS7Q8IWZ6 715 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 SPATA32Q96LK8 384 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 NACA2Q9H009 215 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 TRAF3IP3Q9Y228 551 aa17.84■□□□□ 0.45
SMN2-201ENST00000380741 PLXND1Q9Y4D7 1925 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.83■□□□□ 0.44
SMN2-201ENST00000380741 TLR5O60602 858 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 SYKP43405 635 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 KIR2DL1P43626 348 aaPredicted RBP17.83■□□□□ 0.44
SMN2-201ENST00000380741 KRT85P78386 507 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 HSF5Q4G112 596 aaPredicted RBP17.83■□□□□ 0.44
SMN2-201ENST00000380741 GPRIN1Q7Z2K8 1008 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 ETFBKMTQ8IXQ9 262 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 NAT16Q8N8M0 369 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 TWNKQ96RR1 684 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 DUSP9Q99956 384 aaKnown RBP17.83■□□□□ 0.44
SMN2-201ENST00000380741 FBXO44Q9H4M3 255 aa17.83■□□□□ 0.44
SMN2-201ENST00000380741 TNRC6BQ9UPQ9 1833 aaKnown RBP17.82■□□□□ 0.44
SMN2-201ENST00000380741 MAPK13O15264 365 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 HOXC11O43248 304 aaPredicted RBP17.82■□□□□ 0.44
SMN2-201ENST00000380741 ADAM23O75077 832 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 TULP3O75386 442 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 ALDH1A2O94788 518 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 RHOBTB3O94955 611 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 TBX18O95935 607 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 FAM200BP0CF97 657 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 TRIM49P0CI25 452 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 TRIM49CP0CI26 452 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 NR2F2P24468 414 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 ADORA2BP29275 332 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 TNFRSF4P43489 277 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 VAMP7P51809 220 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 NDUFA8P51970 172 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 INCA1Q0VD86 236 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 ANO4Q32M45 955 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 EOGTQ5NDL2 527 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 BTBD8Q5XKL5 378 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 CLEC20AQ6ZU45 233 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 TMEM25Q86YD3 366 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 OLIG1Q8TAK6 271 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 EDEM2Q9BV94 578 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 APOBEC3GQ9HC16 384 aaKnown RBP17.82■□□□□ 0.44
SMN2-201ENST00000380741 TLR8Q9NR97 1041 aaKnown RBP17.82■□□□□ 0.44
SMN2-201ENST00000380741 SPHK2Q9NRA0 654 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 MAPK8IP1Q9UQF2 711 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
SMN2-201ENST00000380741 FAM237AA0A1B0GTK4 181 aa17.81■□□□□ 0.44
SMN2-201ENST00000380741 LNP1A1A4G5 178 aa17.81■□□□□ 0.44
SMN2-201ENST00000380741 CYP26A1O43174 497 aa17.81■□□□□ 0.44
SMN2-201ENST00000380741 KIF20AO95235 890 aa17.81■□□□□ 0.44
SMN2-201ENST00000380741 GCLMP48507 274 aa17.81■□□□□ 0.44
SMN2-201ENST00000380741 PPP3CAQ08209 521 aa17.81■□□□□ 0.44
SMN2-201ENST00000380741 NFIL3Q16649 462 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms