RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TRPV1Q8NER1 839 aa24.11■■□□□ 1.45
VPS16-201ENST00000380443 FRMD8Q9BZ67 464 aaPredicted RBP24.11■■□□□ 1.45
VPS16-201ENST00000380443 DNAJC17Q9NVM6 304 aaKnown RBP24.11■■□□□ 1.45
VPS16-201ENST00000380443 FETUBQ9UGM5 382 aa24.11■■□□□ 1.45
VPS16-201ENST00000380443 PIK3R2O00459 728 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 GRAP2O75791 330 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 GABBR2O75899 941 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 SEC24CP53992 1094 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 ATP11AP98196 1134 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 HIF1AQ16665 826 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 CDO1Q16878 200 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 SLC9A4Q6AI14 798 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 SCYL2Q6P3W7 929 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 STRADAQ7RTN6 431 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 TMEM86AQ8N2M4 240 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 NAT8LQ8N9F0 302 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 B3GALNT2Q8NCR0 500 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 ARRDC4Q8NCT1 418 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 C9orf72Q96LT7 481 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 PCDH18Q9HCL0 1135 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 SCN10AQ9Y5Y9 1956 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 PTGESO14684 152 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 CCDC130P13994 396 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 LMO2P25791 158 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 ADORA2BP29275 332 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 PHBP35232 272 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 PSMC4P43686 418 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 NBPF20Q3BBV1 942 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 ANKRD20A8PQ5CZ79 823 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 DARS2Q6PI48 645 aaKnown RBP24.1■■□□□ 1.45
VPS16-201ENST00000380443 PPP1R21Q6ZMI0 780 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 PSTKQ8IV42 348 aaKnown RBP24.1■■□□□ 1.45
VPS16-201ENST00000380443 ATXN2LQ8WWM7 1075 aaKnown RBP24.1■■□□□ 1.45
VPS16-201ENST00000380443 KCTD13Q8WZ19 329 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 CHMP6Q96FZ7 201 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 PWWP2AQ96N64 755 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 DUSP16Q9BY84 665 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 SAE1Q9UBE0 346 aaPredicted RBP24.1■■□□□ 1.45
VPS16-201ENST00000380443 GIT1Q9Y2X7 761 aa24.1■■□□□ 1.45
VPS16-201ENST00000380443 CYB561D2O14569 222 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 GABRDO14764 452 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 GPR182O15218 404 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 PAX3P23760 479 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 HDAC4P56524 1084 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 PKN2Q16513 984 aaKnown RBP24.09■■□□□ 1.45
VPS16-201ENST00000380443 DPYSL2Q16555 572 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 TADA2BQ86TJ2 420 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 SERINC5Q86VE9 423 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 UNC45BQ8IWX7 931 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 SLC2A14Q8TDB8 520 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 CPT1BQ92523 772 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 RTP4Q96DX8 246 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 UBN1Q9NPG3 1134 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 FAM105AQ9NUU6 356 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.09■■□□□ 1.45
VPS16-201ENST00000380443 ST3GAL5Q9UNP4 418 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 TRIM17Q9Y577 477 aa24.09■■□□□ 1.45
VPS16-201ENST00000380443 E7ESA3 106 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 SEPT4O43236 478 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 RARBP10826 455 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 IL4RP24394 825 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 HOXD10P28358 340 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 COL13A1Q5TAT6 717 aaPredicted RBP24.08■■□□□ 1.45
VPS16-201ENST00000380443 YTHDF3Q7Z739 585 aaKnown RBP24.08■■□□□ 1.45
VPS16-201ENST00000380443 PLD5Q8N7P1 536 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 MDM1Q8TC05 714 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 SNRNP25Q9BV90 132 aaKnown RBP24.08■■□□□ 1.45
VPS16-201ENST00000380443 SENP6Q9GZR1 1112 aaPredicted RBP24.08■■□□□ 1.45
VPS16-201ENST00000380443 TSPYL2Q9H2G4 693 aaPredicted RBP24.08■■□□□ 1.45
VPS16-201ENST00000380443 EURLQ9NYK6 297 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 PAK5Q9P286 719 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 SLC24A2Q9UI40 661 aa24.08■■□□□ 1.45
VPS16-201ENST00000380443 BCLAF3A2AJT9 711 aaKnown RBP24.07■■□□□ 1.44
VPS16-201ENST00000380443 MYADML2A6NDP7 307 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 PTPN1P18031 435 aaKnown RBP24.07■■□□□ 1.44
VPS16-201ENST00000380443 RPL9P32969 192 aaKnown RBP24.07■■□□□ 1.44
VPS16-201ENST00000380443 LHX1P48742 406 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 NR2C2P49116 596 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 GDF10P55107 478 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 BCAR1P56945 870 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 MMRN1Q13201 1228 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 XRCC4Q13426 336 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 MRPL10Q7Z7H8 261 aaKnown RBP24.07■■□□□ 1.44
VPS16-201ENST00000380443 SENP1Q9P0U3 644 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 NAALADL1Q9UQQ1 740 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 CORO7P57737 925 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 PDIA2Q13087 525 aaKnown RBP24.07■■□□□ 1.44
VPS16-201ENST00000380443 PDIK1LQ8N165 341 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 FAM71DQ8N9W8 422 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 B3GNT5Q9BYG0 378 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 ARHGAP39Q9C0H5 1083 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 RABEP2Q9H5N1 569 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 GOLGA2P5Q9HBQ8 144 aa24.07■■□□□ 1.44
VPS16-201ENST00000380443 RCOR3Q9P2K3 495 aaPredicted RBP24.07■■□□□ 1.44
VPS16-201ENST00000380443 ZMYND8Q9ULU4 1186 aaPredicted RBP24.07■■□□□ 1.44
VPS16-201ENST00000380443 EXOC1LA0A1B0GW35 172 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 THP07101 528 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 LCP1P13796 627 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 MATKP42679 507 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 RAB27AP51159 221 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms