RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TRIM49D1C9J1S8 452 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF701M0R085 212 aaPredicted RBP8.52□□□□□ -1.05
PTPRR-203ENST00000378778 GNPATO15228 680 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 IFNB1P01574 187 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 SERPINB2P05120 415 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ETS1P14921 441 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 GABRB2P47870 512 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 USP46P62068 366 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 OTUD4Q01804 1114 aaKnown RBP8.52□□□□□ -1.05
PTPRR-203ENST00000378778 TBL3Q12788 808 aaKnown RBP8.52□□□□□ -1.05
PTPRR-203ENST00000378778 CCNIQ14094 377 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 TFDP2Q14188 446 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 KRT81Q14533 505 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 SFT2D3Q587I9 215 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ZFYVE27Q5T4F4 411 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 KAZNQ674X7 775 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF554Q86TJ5 538 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 FBXW8Q8N3Y1 598 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ACTL9Q8TC94 416 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 PRR11Q96HE9 360 aaPredicted RBP8.52□□□□□ -1.05
PTPRR-203ENST00000378778 RILPQ96NA2 401 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 DDX50Q9BQ39 737 aaKnown RBP8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ARMCX1Q9P291 453 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 HERC5Q9UII4 1024 aaKnown RBP8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ARHGAP26Q9UNA1 814 aa8.52□□□□□ -1.05
PTPRR-203ENST00000378778 ARHGAP42A6NI28 874 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 PRR5-ARHGAP8B1AHC4 643 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF487B1APH4 448 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 TISP43B9A030 160 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 VILLO15195 856 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 H2AFYO75367 372 aaKnown RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF189O75820 626 aaPredicted RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 CD48P09326 243 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ELK3P41970 407 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 MTTPP55157 894 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 NLRP11P59045 1033 aaKnown RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ARHGAP8P85298 464 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 KDSRQ06136 332 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 APOFQ13790 326 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 EFTUD2Q15029 972 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 LLGL1Q15334 1064 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 CHI3L2Q15782 390 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 KBTBD12Q3ZCT8 623 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 HSF5Q4G112 596 aaPredicted RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 FAM43BQ6ZT52 329 aaPredicted RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ERI1Q8IV48 349 aaKnown RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 PPP4R1Q8TF05 950 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 CGRRF1Q99675 332 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 WDR83Q9BRX9 315 aaKnown RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 XAB2Q9HCS7 855 aaKnown RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 MRPL40Q9NQ50 206 aaKnown RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 CDH22Q9UJ99 828 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 FEM1BQ9UK73 627 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 WDR37Q9Y2I8 494 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 TMX2Q9Y320 296 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 TTLL3Q9Y4R7 772 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 A0A0B4J269 797 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 DYTNA2CJ06 578 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 GLRA3O75311 464 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 RFPL1O75677 317 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 C1QAP02745 245 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 KDELR1P24390 212 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 CRKP46108 304 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ALDH1A3P47895 512 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 TRPC3Q13507 836 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 TUBB3Q13509 450 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 FAXCQ5TGI0 409 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 IRAK1BP1Q5VVH5 260 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ANKRD22Q5VYY1 191 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 C16orf89Q6UX73 402 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 PQLC1Q8N2U9 271 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 CMASQ8NFW8 434 aaPredicted RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 ATP2A3Q93084 1043 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 LRGUKQ96M69 825 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 IMPG2Q9BZV3 1241 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 MAF1Q9H063 256 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 LHX5Q9H2C1 402 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 PDZD7Q9H5P4 517 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 KCNH7Q9NS40 1196 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
PTPRR-203ENST00000378778 BTBD7Q9P203 1132 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 HSFX1Q9UBD0 423 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 DCDC2Q9UHG0 476 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 RPS6KL1Q9Y6S9 549 aa8.51□□□□□ -1.05
PTPRR-203ENST00000378778 SSC5DA1L4H1 1573 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 FAM159BA6NKW6 160 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 KBTBD13C9JR72 458 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 PI4K2BG5E9Z4 385 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GOLGA8RI6L899 631 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 WDR46O15213 610 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 STAM2O75886 525 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TMEM63AO94886 807 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SERPINE1P05121 402 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TFAP2AP05549 437 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GJC1P36383 396 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GRIA2P42262 883 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms