RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 THAP9Q9H5L6 903 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 CHORDC1Q9UHD1 332 aaPredicted RBP17.95■□□□□ 0.46
RER1-202ENST00000378512 KIAA1549LQ6ZVL6 1849 aa17.95■□□□□ 0.46
RER1-202ENST00000378512 GTPBP10A4D1E9 387 aaKnown RBP17.94■□□□□ 0.46
RER1-202ENST00000378512 LEFTY2O00292 366 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 COCHO43405 550 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 PAEPP09466 180 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 VDRP11473 427 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 ZNF132P52740 706 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 IFRD2Q12894 506 aaPredicted RBP17.94■□□□□ 0.46
RER1-202ENST00000378512 SRSF5Q13243 272 aaKnown RBP17.94■□□□□ 0.46
RER1-202ENST00000378512 EML3Q32P44 896 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 PKDCCQ504Y2 493 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 HECTD3Q5T447 861 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 NAIF1Q69YI7 327 aaPredicted RBP17.94■□□□□ 0.46
RER1-202ENST00000378512 SMYD5Q6GMV2 418 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 PKN3Q6P5Z2 889 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 CCDC186Q7Z3E2 898 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 TTC30AQ86WT1 665 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 ARHGEF19Q8IW93 802 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 PPM1KQ8N3J5 372 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 KAT5Q92993 513 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 KREMEN1Q96MU8 473 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 EBF3Q9H4W6 596 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 CYLDQ9NQC7 956 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 GMIPQ9P107 970 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 NCDNQ9UBB6 729 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 DACH1Q9UI36 760 aa17.94■□□□□ 0.46
RER1-202ENST00000378512 GOLGA6L22H0YM25 854 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 RNF225M0QZC1 329 aaPredicted RBP17.93■□□□□ 0.46
RER1-202ENST00000378512 O00370 1275 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 ARSAP15289 507 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 SGO2Q562F6 1265 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 CC2D1AQ6P1N0 951 aaPredicted RBP17.93■□□□□ 0.46
RER1-202ENST00000378512 IER2Q9BTL4 223 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 INTS2Q9H0H0 1204 aaKnown RBP17.93■□□□□ 0.46
RER1-202ENST00000378512 TLR8Q9NR97 1041 aaKnown RBP17.93■□□□□ 0.46
RER1-202ENST00000378512 OSER1Q9NX31 292 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 TSPAN16Q9UKR8 245 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 CPQQ9Y646 472 aa17.93■□□□□ 0.46
RER1-202ENST00000378512 MYOFQ9NZM1 2061 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 CHURC1-FNTBB4DL54 471 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 K7ESF4 209 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 CXCL12P48061 93 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 FNTBP49356 437 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 CCR3P51677 355 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 CCINQ13939 588 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 KLHDC10Q6PID8 442 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 PIGZQ86VD9 579 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 TTC16Q8NEE8 873 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 ZSWIM1Q9BR11 485 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 CCSER2Q9H7U1 834 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 ECT2Q9H8V3 914 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 PARD6AQ9NPB6 346 aa17.92■□□□□ 0.46
RER1-202ENST00000378512 POLR3BQ9NW08 1133 aaPredicted RBP17.92■□□□□ 0.46
RER1-202ENST00000378512 DUS2Q9NX74 493 aaKnown RBP17.92■□□□□ 0.46
RER1-202ENST00000378512 TRDMT1O14717 391 aaKnown RBP17.91■□□□□ 0.46
RER1-202ENST00000378512 XPO1O14980 1071 aaKnown RBP17.91■□□□□ 0.46
RER1-202ENST00000378512 CYP26A1O43174 497 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 ABL1P00519 1130 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 TGM1P22735 817 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 PSEN1P49768 467 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 BCAT1P54687 386 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 LRRC32Q14392 662 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 HEATR6Q6AI08 1181 aaKnown RBP17.91■□□□□ 0.46
RER1-202ENST00000378512 TRIM65Q6PJ69 517 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 TMEM270Q6UE05 265 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 LCLAT1Q6UWP7 414 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 RRAGAQ7L523 313 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 SCD5Q86SK9 330 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 DDX42Q86XP3 938 aaKnown RBP eCLIP17.91■□□□□ 0.46
RER1-202ENST00000378512 SPEM1Q8N4L4 309 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 TFAP2BQ92481 460 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 ATP2A3Q93084 1043 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 LINC00597Q9H2U6 94 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 NMUR1Q9HB89 426 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 FBRSL1Q9HCM7 1045 aaKnown RBP17.91■□□□□ 0.46
RER1-202ENST00000378512 WNT6Q9Y6F9 365 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 CEP250Q9BV73 2442 aa17.91■□□□□ 0.46
RER1-202ENST00000378512 CACNA1AO00555 2505 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 E2F8A0AVK6 867 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 TLR5O60602 858 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 MBD3O95983 291 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 GJA4P35212 333 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 PLA2G4AP47712 749 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 BST2Q10589 180 aaKnown RBP17.9■□□□□ 0.46
RER1-202ENST00000378512 MAN2A1Q16706 1144 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 TMEM196Q5HYL7 178 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 MIIPQ5JXC2 388 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 PM20D1Q6GTS8 502 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 ENOSF1Q7L5Y1 443 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 FAM114A1Q8IWE2 563 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 ADGRG2Q8IZP9 1017 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 ENOX1Q8TC92 643 aaKnown RBP17.9■□□□□ 0.46
RER1-202ENST00000378512 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.9■□□□□ 0.461e-7■■□□□ 11.5
RER1-202ENST00000378512 CLIC5Q9NZA1 410 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 PCDHB4Q9Y5E5 795 aa17.9■□□□□ 0.46
RER1-202ENST00000378512 TULP2O00295 520 aa17.89■□□□□ 0.46
RER1-202ENST00000378512 HRO43593 1189 aa17.89■□□□□ 0.46
RER1-202ENST00000378512 GREM1O60565 184 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms