RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 PROSCO94903 275 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 DLGAP3O95886 979 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 PDGFRBP09619 1106 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 PSMA4P25789 261 aaKnown RBP14.98□□□□□ -0.01
PRDM16-203ENST00000378391 NUP107P57740 925 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 RUNX1T1Q06455 604 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 SLC26A11Q86WA9 606 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 STX19Q8N4C7 294 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 SUN5Q8TC36 379 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 JADE3Q92613 823 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 PGM2Q96G03 612 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 FAM49BQ9NUQ9 324 aa14.98□□□□□ -0.01
PRDM16-203ENST00000378391 ZBTB39O15060 712 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 CLK1P49759 484 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 OLR1P78380 273 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 INTS5Q6P9B9 1019 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 KRT74Q7RTS7 529 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 SPATA2LQ8IUW3 424 aaPredicted RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 INPP5DQ92835 1189 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 PABPC5Q96DU9 382 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 MTMR9Q96QG7 549 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 PAFAH2Q99487 392 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 NEUROG2Q9H2A3 272 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 CATSPERBQ9H7T0 1116 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 ZNF556Q9HAH1 456 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 A1CFQ9NQ94 594 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 DDX3XO00571 662 aaKnown RBP eCLIP14.97□□□□□ -0.013e-7■■■■□ 19.6
PRDM16-203ENST00000378391 RIPK2O43353 540 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 CNTFP26441 200 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 MTFR1Q15390 333 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 TRMT5Q32P41 509 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 DCAF6Q58WW2 860 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 CYP4A22Q5TCH4 519 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 SMIM5Q71RC9 77 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 MTDHQ86UE4 582 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 TMC2Q8TDI7 906 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 ATXN2LQ8WWM7 1075 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 MAML3Q96JK9 1138 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 RPS6KL1Q9Y6S9 549 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 TNPO2O14787 897 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 CPB1P15086 417 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 RPL21P46778 160 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 THEMIS2Q5TEJ8 643 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 CATSPER2Q96P56 530 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 RBBP8Q99708 897 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 TAGLN3Q9UI15 199 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 TSR3Q9UJK0 312 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 R3HDM2Q9Y2K5 976 aaKnown RBP14.97□□□□□ -0.01
PRDM16-203ENST00000378391 TUBGCP6Q96RT7 1819 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 STRNO43815 780 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 PDK2Q15119 407 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 WASHC2DQ5SRD0 308 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 UBA3Q8TBC4 463 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 GANQ9H2C0 597 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 SOX13Q9UN79 622 aa14.97□□□□□ -0.01
PRDM16-203ENST00000378391 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 TIMM44O43615 452 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 GARTP22102 1010 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 ALDH5A1P51649 535 aaPredicted RBP14.96□□□□□ -0.01
PRDM16-203ENST00000378391 LAYNQ6UX15 382 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 CBWD2Q8IUF1 395 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 MICU2Q8IYU8 434 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 CCDC126Q96EE4 140 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 HPDLQ96IR7 371 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 KIAA1257Q9ULG3 409 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 MYH8P13535 1937 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 BTNL10A8MVZ5 291 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 ADAMTS3O15072 1205 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 GAS2O43903 313 aaKnown RBP14.96□□□□□ -0.01
PRDM16-203ENST00000378391 ANXA9O76027 345 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 FKBP9O95302 570 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 RXRBP28702 533 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 GRIK1P39086 918 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 RGS4P49798 205 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 PRR5LQ6MZQ0 368 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 FKBP9P1Q75LS8 142 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 FASTKD5Q7L8L6 764 aaKnown RBP14.96□□□□□ -0.01
PRDM16-203ENST00000378391 P3H2Q8IVL5 708 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 IPMKQ8NFU5 416 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 PRCCQ92733 491 aaPredicted RBP14.96□□□□□ -0.01
PRDM16-203ENST00000378391 GPRASP2Q96D09 838 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 NAALADL1Q9UQQ1 740 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 SDR42E2A6NKP2 422 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 RRM1P23921 792 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 CCT3P49368 545 aaKnown RBP14.96□□□□□ -0.01
PRDM16-203ENST00000378391 RASA2Q15283 850 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 KIZQ2M2Z5 673 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 SPDYCQ5MJ68 293 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 DCUN1D1Q96GG9 259 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 SHCBP1LQ9BZQ2 653 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 NRDE2Q9H7Z3 1164 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 ARFGEF2Q9Y6D5 1785 aa14.96□□□□□ -0.01
PRDM16-203ENST00000378391 E2F8A0AVK6 867 aa14.96□□□□□ -0.02
PRDM16-203ENST00000378391 SREBF1P36956 1147 aa14.96□□□□□ -0.02
PRDM16-203ENST00000378391 OTUD4Q01804 1114 aaKnown RBP14.96□□□□□ -0.02
PRDM16-203ENST00000378391 DENND1BQ6P3S1 775 aa14.96□□□□□ -0.02
PRDM16-203ENST00000378391 GANCQ8TET4 914 aa14.96□□□□□ -0.02
PRDM16-203ENST00000378391 SH3KBP1Q96B97 665 aa14.96□□□□□ -0.02
PRDM16-203ENST00000378391 OTUD5Q96G74 571 aa14.96□□□□□ -0.02
PRDM16-203ENST00000378391 LATS2Q9NRM7 1088 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms