RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 ECSITQ9BQ95 431 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 MRPL4Q9BYD3 311 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 FETUBQ9UGM5 382 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 PCDHGC3Q9UN70 934 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 PHIPQ8WWQ0 1821 aa17.29■□□□□ 0.36
PCDHA1-201ENST00000378133 IGKV6D-21A0A0A0MT36 114 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 FAM237BA0A1B0GVD1 139 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 BAG2O95816 211 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 MT-ND3P03897 115 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 BGNP21810 368 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 KDELR1P24390 212 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 STAT5BP51692 787 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 KLHL38Q2WGJ6 581 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ZNF699Q32M78 642 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 BBS9Q3SYG4 887 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 C6orf163Q5TEZ5 329 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 POLNQ7Z5Q5 900 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 SCUBE1Q8IWY4 988 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 PALM2Q8IXS6 379 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 MICALL2Q8IY33 904 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ZNF668Q96K58 619 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 TTC1Q99614 292 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 POLIQ9UNA4 740 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 CIB2O75838 187 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ICAM3P32942 547 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ASPAP45381 313 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 RAP1GAPP47736 663 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 AP2B1P63010 937 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ORC1Q13415 861 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 TAF5Q15542 800 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 DCAF15Q66K64 600 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ALYREFQ86V81 257 aaKnown RBP17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 THNSL1Q8IYQ7 743 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ACO2Q99798 780 aaKnown RBP17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 CENPKQ9BS16 269 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 DHRS4Q9BTZ2 278 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 ARHGEF4Q9NR80 690 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 NDE1Q9NXR1 346 aa17.28■□□□□ 0.36
PCDHA1-201ENST00000378133 NDC80O14777 642 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 OGTO15294 1046 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 TMEM63AO94886 807 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 ENO1P06733 434 aaKnown RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 KRT7P08729 469 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 HADHQ16836 314 aaKnown RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 LIN52Q52LA3 116 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 RIPOR1Q6ZS17 1223 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 NET1Q7Z628 596 aaPredicted RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 CDR2LQ86X02 465 aaPredicted RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 DCAKDQ8WVC6 231 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 OPTNQ96CV9 577 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 FAM111AQ96PZ2 611 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 ACSS3Q9H6R3 686 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 STRIP2Q9ULQ0 834 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 SPDYE16A6NNV3 312 aaPredicted RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 POLR2BP30876 1174 aaKnown RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 CDH8P55286 799 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 BBS12Q6ZW61 710 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 TMEM130Q8N3G9 435 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 RNF149Q8NC42 400 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 KCTD6Q8NC69 237 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 FBXO27Q8NI29 283 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 C12orf42Q96LP6 360 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 CYTH2Q99418 400 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 CCDC28BQ9BUN5 200 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 XYLT2Q9H1B5 865 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 XPO7Q9UIA9 1087 aaKnown RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 CPSF3Q9UKF6 684 aaKnown RBP17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 SLC4A7Q9Y6M7 1214 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 SIP14410 1827 aa17.27■□□□□ 0.36
PCDHA1-201ENST00000378133 MAFO75444 373 aaPredicted RBP17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 FARP2O94887 1054 aaPredicted RBP17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 CDK7P50613 346 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 BASP1P80723 227 aaKnown RBP17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 TRMT5Q32P41 509 aaKnown RBP17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 SYCP2LQ5T4T6 812 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 CHSY1Q86X52 802 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 TTC13Q8NBP0 860 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 RBM15BQ8NDT2 890 aaKnown RBP17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 NCSTNQ92542 709 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 CLPTM1LQ96KA5 538 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 PANX3Q96QZ0 392 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 CPXM1Q96SM3 734 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 THTPAQ9BU02 230 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 EFR3BQ9Y2G0 817 aa17.27■□□□□ 0.35
PCDHA1-201ENST00000378133 CREB3O43889 395 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 KRT19P08727 400 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 HOXC6P09630 235 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 CRABP2P29373 138 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 YWHAEP62258 255 aaKnown RBP17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 GRM1Q13255 1194 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 CFAP157Q5JU67 520 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 EEPD1Q7L9B9 569 aa17.26■□□□□ 0.35
PCDHA1-201ENST00000378133 RFX6Q8HWS3 928 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms