RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CDO1Q16878 200 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 ZNF699Q32M78 642 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 TTC39BQ5VTQ0 682 aaPredicted RBP18.73■□□□□ 0.59
GNE-201ENST00000377902 CMASQ8NFW8 434 aaPredicted RBP18.73■□□□□ 0.59
GNE-201ENST00000377902 RILPQ96NA2 401 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.73■□□□□ 0.59
GNE-201ENST00000377902 PCMTD2Q9NV79 361 aa18.73■□□□□ 0.59
GNE-201ENST00000377902 I3L4J1 428 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 GRAP2O75791 330 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 TRUB2O95900 331 aaKnown RBP18.72■□□□□ 0.59
GNE-201ENST00000377902 EGFRP00533 1210 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 SRGAP2CP0DJJ0 459 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 CDH6P55285 790 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 ROR2Q01974 943 aaKnown RBP18.72■□□□□ 0.59
GNE-201ENST00000377902 MROH9Q5TGP6 573 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 TRMT10BQ6PF06 316 aaKnown RBP18.72■□□□□ 0.59
GNE-201ENST00000377902 WDR49Q8IV35 697 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 TTLL6Q8N841 843 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 CEP120Q8N960 986 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 FGD4Q96M96 766 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 TWNKQ96RR1 684 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 TUBGCP5Q96RT8 1024 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 KCNK4Q9NYG8 393 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 COL4A5P29400 1685 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 MAGEA13PA6NCF6 341 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 A8MXQ7 604 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 KRT19P08727 400 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 CSH1P0DML2 217 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 CSH2P0DML3 217 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 SMAD1Q15797 465 aaKnown RBP18.72■□□□□ 0.59
GNE-201ENST00000377902 C15orf59Q2T9L4 293 aaPredicted RBP18.72■□□□□ 0.59
GNE-201ENST00000377902 FAM83AQ86UY5 434 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 NUDCD3Q8IVD9 361 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 XYLT2Q9H1B5 865 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 GPATCH2LQ9NWQ4 482 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 ZC3H7BQ9UGR2 993 aaKnown RBP18.72■□□□□ 0.59
GNE-201ENST00000377902 HEY1Q9Y5J3 304 aa18.72■□□□□ 0.59
GNE-201ENST00000377902 MAFGO15525 162 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 KCNN4O15554 427 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 PEX10O60683 326 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 APRTP07741 180 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 RBBP5Q15291 538 aaKnown RBP18.71■□□□□ 0.59
GNE-201ENST00000377902 DUOXA2Q1HG44 320 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 TEX44Q53QW1 395 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 C1orf146Q5VVC0 180 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 GSTCDQ8NEC7 633 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 USP6NLQ92738 828 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 PIWIL1Q96J94 861 aaKnown RBP18.71■□□□□ 0.59
GNE-201ENST00000377902 HMX2A2RU54 273 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 MAGEC1O60732 1142 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 TM7SF2O76062 418 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 LYNP07948 512 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 SNRPAP09012 282 aaKnown RBP18.71■□□□□ 0.59
GNE-201ENST00000377902 YWHAEP62258 255 aaKnown RBP18.71■□□□□ 0.59
GNE-201ENST00000377902 MAP3K10Q02779 954 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 TRNP1Q6NT89 227 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 CAND1Q86VP6 1230 aaKnown RBP18.71■□□□□ 0.59
GNE-201ENST00000377902 MPP5Q8N3R9 675 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 POU5F2Q8N7G0 328 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 PRPF31Q8WWY3 499 aaKnown RBP18.71■□□□□ 0.59
GNE-201ENST00000377902 CCDC106Q9BWC9 280 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 SHCBP1LQ9BZQ2 653 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 USP29Q9HBJ7 922 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 POPDC2Q9HBU9 364 aa18.71■□□□□ 0.59
GNE-201ENST00000377902 MAFBQ9Y5Q3 323 aaPredicted RBP18.71■□□□□ 0.59
GNE-201ENST00000377902 SPATA31C2B4DYI2 1134 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 KLF11O14901 512 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 LYPLA1O75608 230 aaPredicted RBP18.7■□□□□ 0.58
GNE-201ENST00000377902 SLC25A3Q00325 362 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 NOMO1Q15155 1222 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 RAPH1Q70E73 1250 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 KRT27Q7Z3Y8 459 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 MYLK4Q86YV6 388 aaPredicted RBP18.7■□□□□ 0.58
GNE-201ENST00000377902 SDCBP2Q9H190 292 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 SLC17A6Q9P2U8 582 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 TAGLN3Q9UI15 199 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 ADCY3O60266 1144 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 C6orf222P0C671 652 aaPredicted RBP18.7■□□□□ 0.58
GNE-201ENST00000377902 RBL1P28749 1068 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 POLR2BP30876 1174 aaKnown RBP18.7■□□□□ 0.58
GNE-201ENST00000377902 ACTR3P61158 418 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 CYP4V2Q6ZWL3 525 aaPredicted RBP18.7■□□□□ 0.58
GNE-201ENST00000377902 TMEM192Q8IY95 271 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 UNC5BQ8IZJ1 945 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 NDUFAF2Q8N183 169 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 ARHGAP24Q8N264 748 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 UBA3Q8TBC4 463 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 PYDC1Q8WXC3 89 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 C7orf26Q96N11 449 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 SMYD3Q9H7B4 428 aa18.7■□□□□ 0.58
GNE-201ENST00000377902 F5H423 210 aaPredicted RBP18.69■□□□□ 0.58
GNE-201ENST00000377902 MSCO60682 206 aa18.69■□□□□ 0.58
GNE-201ENST00000377902 KRT37O76014 449 aa18.69■□□□□ 0.58
GNE-201ENST00000377902 RNF8O76064 485 aa18.69■□□□□ 0.58
GNE-201ENST00000377902 ZRSR2Q15696 482 aaKnown RBP18.69■□□□□ 0.58
GNE-201ENST00000377902 C16orf46Q6P387 395 aa18.69■□□□□ 0.58
GNE-201ENST00000377902 NET1Q7Z628 596 aaPredicted RBP18.69■□□□□ 0.58
GNE-201ENST00000377902 MFN1Q8IWA4 741 aa18.69■□□□□ 0.58
GNE-201ENST00000377902 ECSITQ9BQ95 431 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms