RNA–Protein interactions for RNA: ENST00000377348.6

VPS28-202, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS28, Length 1,097 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-202ENST00000377348 MBL2P11226 248 aaPredicted RBP14.06□□□□□ -0.16
VPS28-202ENST00000377348 RARGP13631 454 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 RFX1P22670 979 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 GPD2P43304 727 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 PDE6CP51160 858 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 SLC7A9P82251 487 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 PTK2Q05397 1052 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 TNK2Q07912 1038 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 USP4Q13107 963 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 TRIM68Q6AZZ1 485 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 BHLHA9Q7RTU4 235 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 PASD1Q8IV76 773 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 KCTD13Q8WZ19 329 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 IRF7Q92985 503 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 ZFRQ96KR1 1074 aaKnown RBP14.06□□□□□ -0.16
VPS28-202ENST00000377348 STK33Q9BYT3 514 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 ARHGEF3Q9NR81 526 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 CYTH4Q9UIA0 394 aa14.06□□□□□ -0.16
VPS28-202ENST00000377348 A0A1B0GTH6 734 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 FAM170AA1A519 330 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 LEFTY2O00292 366 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 CHADO15335 359 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 SERPINC1P01008 464 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 PFKLP17858 780 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 TUBP50607 506 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 PFKPQ01813 784 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 MTF1Q14872 753 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 ARHGAP29Q52LW3 1261 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 PM20D1Q6GTS8 502 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 LRSAM1Q6UWE0 723 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 SIX6OS1Q8N1H7 587 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 FLCNQ8NFG4 579 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 NEK11Q8NG66 645 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 CLEC4CQ8WTT0 213 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 DNASE1L2Q92874 299 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 WBP2Q969T9 261 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 NACA2Q9H009 215 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 MFSD1Q9H3U5 465 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 TSPY26PQ9H489 355 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 CYLDQ9NQC7 956 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 ST7Q9NRC1 585 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 GKN1Q9NS71 199 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■■□□□ 14.1
VPS28-202ENST00000377348 GTSE1Q9NYZ3 720 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 WNT6Q9Y6F9 365 aa14.05□□□□□ -0.16
VPS28-202ENST00000377348 YJEFN3A6XGL0 299 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 E7ENQ6 273 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 GOLGA6L19H0YKK7 550 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 GFPT2O94808 682 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 CAVIN2O95810 425 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 IRF1P10914 325 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 ARSAP15289 507 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 CYP11B1P15538 503 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 CD72P21854 359 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 SOX9P48436 509 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 JAM2P57087 298 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 YWHAGP61981 247 aaKnown RBP eCLIP14.04□□□□□ -0.16
VPS28-202ENST00000377348 TPM4P67936 248 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 FANCCQ00597 558 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 MLF2Q15773 248 aaPredicted RBP14.04□□□□□ -0.16
VPS28-202ENST00000377348 FILIP1LQ4L180 1135 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 CWF19L1Q69YN2 538 aaKnown RBP14.04□□□□□ -0.16
VPS28-202ENST00000377348 CC2D1AQ6P1N0 951 aaPredicted RBP14.04□□□□□ -0.16
VPS28-202ENST00000377348 BMP8AQ7Z5Y6 402 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 WDTC1Q8N5D0 677 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 HSFY1Q96LI6 401 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 MIS12Q9H081 205 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 EBF3Q9H4W6 596 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 TBC1D17Q9HA65 648 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 HPS4Q9NQG7 708 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 THG1LQ9NWX6 298 aaKnown RBP14.04□□□□□ -0.16
VPS28-202ENST00000377348 CFAP97Q9P2B7 532 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 TJP2Q9UDY2 1190 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 PCDHGC3Q9UN70 934 aa14.04□□□□□ -0.16
VPS28-202ENST00000377348 OTOL1A6NHN0 477 aaPredicted RBP14.03□□□□□ -0.16
VPS28-202ENST00000377348 SHISA7A6NL88 538 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 STK25O00506 426 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 TCF3P15923 654 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 KRT9P35527 623 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 ATP5C1P36542 298 aaKnown RBP14.03□□□□□ -0.16
VPS28-202ENST00000377348 PSEN1P49768 467 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 VCPP55072 806 aaKnown RBP14.03□□□□□ -0.16
VPS28-202ENST00000377348 DAOAP59103 153 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 BPIFB4P59827 614 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 PDCLQ13371 301 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 MEA1Q16626 185 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 C10orf120Q5SQS8 335 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 TAF3Q5VWG9 929 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 TPRG1Q6ZUI0 275 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 NOP9Q86U38 636 aaKnown RBP14.03□□□□□ -0.16
VPS28-202ENST00000377348 SCUBE3Q8IX30 993 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 FBXL6Q8N531 539 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 RNF214Q8ND24 703 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 C1orf131Q8NDD1 294 aaKnown RBP14.03□□□□□ -0.16
VPS28-202ENST00000377348 CSGALNACT1Q8TDX6 532 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 OSCP1Q8WVF1 389 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 EDEM1Q92611 657 aa14.03□□□□□ -0.16
VPS28-202ENST00000377348 SPAG5Q96R06 1193 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms