RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ADAMTS5Q9UNA0 930 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 ACTL7BQ9Y614 415 aa13.46□□□□□ -0.26
USP11-204ENST00000377107 MYO18AQ92614 2054 aaKnown RBP13.46□□□□□ -0.26
USP11-204ENST00000377107 CXorf49A8MYA2 514 aaPredicted RBP13.45□□□□□ -0.26
USP11-204ENST00000377107 AKAP5P24588 427 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 MUM1Q2TAK8 710 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 PMF1Q6P1K2 205 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 C16orf46Q6P387 395 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 FAM131BQ86XD5 332 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 NDUFAF2Q8N183 169 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 FAM13CQ8NE31 585 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 DEPDC1BQ8WUY9 529 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 CNPY3Q9BT09 278 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 KLC2Q9H0B6 622 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 HBP1O60381 514 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 OSBPP22059 807 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 RABGGTBP53611 331 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 CHI3L2Q15782 390 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 EFHC2Q5JST6 749 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 ANKRD20A2Q5SQ80 823 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 ANKRD20A1Q5TYW2 823 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 RFWD3Q6PCD5 774 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 DENND5BQ6ZUT9 1274 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 CATSPER4Q7RTX7 472 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.45□□□□□ -0.268e-14■■□□□ 11.4
USP11-204ENST00000377107 DENND1AQ8TEH3 1009 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 PGLYRP2Q96PD5 576 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 SRPK1Q96SB4 655 aaKnown RBP13.45□□□□□ -0.26
USP11-204ENST00000377107 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 SNTG2Q9NY99 539 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 WDR35Q9P2L0 1181 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 G3BP2Q9UN86 482 aaKnown RBP13.45□□□□□ -0.26
USP11-204ENST00000377107 CNTN6Q9UQ52 1028 aa13.45□□□□□ -0.26
USP11-204ENST00000377107 KRT37O76014 449 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 BAG2O95816 211 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 ABCG1P45844 678 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 GBE1Q04446 702 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 MBTD1Q05BQ5 628 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 ALYREFQ86V81 257 aaKnown RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 NUDCD3Q8IVD9 361 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 HIPK4Q8NE63 616 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 STMN2Q93045 179 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 WDR83Q9BRX9 315 aaKnown RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 ERAP1Q9NZ08 941 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 ZNF112Q9UJU3 913 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 C3orf70A6NLC5 250 aaPredicted RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 TYROBPO43914 113 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 TGFB3P10600 412 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 CCDC130P13994 396 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 PAX7P23759 505 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 GPD2P43304 727 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 NME3Q13232 169 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 TSHZ1Q6ZSZ6 1077 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 UTP4Q969X6 686 aaKnown RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 MRPL45Q9BRJ2 306 aaKnown RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 SNRNP25Q9BV90 132 aaKnown RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 VPS33BQ9H267 617 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 PRMT7Q9NVM4 692 aaPredicted RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 PCDHGC3Q9UN70 934 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 PRPF4O43172 522 aaKnown RBP eCLIP13.44□□□□□ -0.269e-6■□□□□ 10.5
USP11-204ENST00000377107 CILPO75339 1184 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 GMPRP36959 345 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 ADCYAP1R1P41586 468 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 RBP5P82980 135 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 AP1B1Q10567 949 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 NBPF20Q3BBV1 942 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 C18orf25Q96B23 403 aaPredicted RBP13.44□□□□□ -0.26
USP11-204ENST00000377107 PPP1R36Q96LQ0 422 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 TXNDC16Q9P2K2 825 aa13.44□□□□□ -0.26
USP11-204ENST00000377107 H3BRJ5 948 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 FAM189A1O60320 539 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 B4GALT4O60513 344 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 VDRP11473 427 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 AMPD1P23109 780 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 SERPINB4P48594 390 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 PDE1BQ01064 536 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 CDHR3Q6ZTQ4 885 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 C10orf82Q8WW14 230 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 FAM161BQ96MY7 647 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 RNF157Q96PX1 679 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 MFHAS1Q9Y4C4 1052 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
USP11-204ENST00000377107 IL18RAPO95256 599 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 IREB2P48200 963 aaKnown RBP13.43□□□□□ -0.26
USP11-204ENST00000377107 GTF2A2P52657 109 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 ZNF143P52747 638 aaPredicted RBP13.43□□□□□ -0.26
USP11-204ENST00000377107 WLSQ5T9L3 541 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 DRICH1Q6PGQ1 229 aaPredicted RBP13.43□□□□□ -0.26
USP11-204ENST00000377107 CLNKQ7Z7G1 428 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 HACE1Q8IYU2 909 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 PYROXD2Q8N2H3 581 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 MPP5Q8N3R9 675 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 PLD5Q8N7P1 536 aa13.43□□□□□ -0.26
USP11-204ENST00000377107 CFAP61Q8NHU2 1237 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms