RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 HSPA4LO95757 839 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
DDR1-224ENST00000376567 GLRBP48167 497 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 TKTL1P51854 596 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 GDF10P55107 478 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 OGDHQ02218 1023 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 PTK6Q13882 451 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CLEC4CQ8WTT0 213 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 LGMNQ99538 433 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 RPS6KL1Q9Y6S9 549 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 hCG_1818297A0A087WSY0 165 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 H3BRJ5 948 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CBX6O95503 412 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CDC25CP30307 473 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 AVPR1AP37288 418 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 THOC5Q13769 683 aaKnown RBP12.89□□□□□ -0.35
DDR1-224ENST00000376567 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CHI3L2Q15782 390 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 BTBD8Q5XKL5 378 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CYB5D1Q6P9G0 228 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 GPR142Q7Z601 462 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CTU1Q7Z7A3 348 aaKnown RBP12.89□□□□□ -0.35
DDR1-224ENST00000376567 ZDHHC14Q8IZN3 488 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 DDX43Q9NXZ2 648 aaKnown RBP12.89□□□□□ -0.35
DDR1-224ENST00000376567 PAK5Q9P286 719 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 ARMCX1Q9P291 453 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CPB1P15086 417 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 TNFRSF8P28908 595 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 MLH1P40692 756 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
DDR1-224ENST00000376567 SNRNP25Q9BV90 132 aaKnown RBP12.89□□□□□ -0.35
DDR1-224ENST00000376567 ABHD16BQ9H3Z7 469 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 ST6GALNAC4Q9H4F1 302 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 TNFSF13BQ9Y275 285 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 PPP2R3BQ9Y5P8 575 aa12.89□□□□□ -0.35
DDR1-224ENST00000376567 CITO14578 2027 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 LRP5O75197 1615 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 CHUKO15111 745 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 TREHO43280 583 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 JCHAINP01591 159 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 EDN1P05305 212 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 MCF2P10911 925 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 TAF11Q15544 211 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 CCDC142Q17RM4 750 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 SLC10A6Q3KNW5 377 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 HABP4Q5JVS0 413 aaKnown RBP12.88□□□□□ -0.35
DDR1-224ENST00000376567 PMF1Q6P1K2 205 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 MTDHQ86UE4 582 aaKnown RBP12.88□□□□□ -0.35
DDR1-224ENST00000376567 PHF13Q86YI8 300 aaPredicted RBP12.88□□□□□ -0.35
DDR1-224ENST00000376567 CPSF3Q9UKF6 684 aaKnown RBP12.88□□□□□ -0.35
DDR1-224ENST00000376567 COQ4Q9Y3A0 265 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 STAMBPO95630 424 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 USP17L7P0C7H9 530 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 ASPHQ12797 758 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 TRIM56Q9BRZ2 755 aaKnown RBP12.88□□□□□ -0.35
DDR1-224ENST00000376567 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 PCDH9Q9HC56 1237 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 HEY2Q9UBP5 337 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 LRFN2Q9ULH4 789 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 GON4LQ3T8J9 2241 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 KNL1Q8NG31 2342 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 C2orf71A6NGG8 1288 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 SPTLC1O15269 473 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 IL1R2P27930 398 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 SLC26A2P50443 739 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 RAD23BP54727 409 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 DPYSL3Q14195 570 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 MORF4L2Q15014 288 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 RAB6CQ53S08 254 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 KAT2BQ92831 832 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 PGM2Q96G03 612 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 VCPIP1Q96JH7 1222 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 RMDN2Q96LZ7 410 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 RAB6CQ9H0N0 254 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 MANSC1Q9H8J5 431 aa12.88□□□□□ -0.35
DDR1-224ENST00000376567 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
DDR1-224ENST00000376567 A0A1B0GUA9 196 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 DCTN3O75935 186 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 TSPY1Q01534 308 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 GBE1Q04446 702 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 MCL1Q07820 350 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 NR1H3Q13133 447 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 PPIL2Q13356 520 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 ERMARDQ5T6L9 678 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
DDR1-224ENST00000376567 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
DDR1-224ENST00000376567 ENDOD1O94919 500 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms