RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 NPNTQ6UXI9 565 aa11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 MARK2Q7KZI7 788 aaKnown RBP11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 SESTD1Q86VW0 696 aa11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 RASSF3Q86WH2 238 aa11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 PDSS2Q86YH6 399 aa11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 NMD3Q96D46 503 aaKnown RBP11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 VCPIP1Q96JH7 1222 aa11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 KCNK4Q9NYG8 393 aa11.96□□□□□ -0.49
TM9SF2-201ENST00000376387 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 PEX2P28328 305 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 HOXD11P31277 338 aaPredicted RBP11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 IRX4P78413 519 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 PEX6Q13608 980 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 NCOA4Q13772 614 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 FAM91A1Q658Y4 838 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 PCGF5Q86SE9 256 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 CTAGE3PQ8IX95 158 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 C4orf19Q8IY42 314 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 PDIK1LQ8N165 341 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 WDTC1Q8N5D0 677 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 PPM1NQ8N819 430 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 OR6Y1Q8NGX8 325 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 PPP2R3CQ969Q6 453 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 OPTNQ96CV9 577 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 MASTLQ96GX5 879 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 RILPQ96NA2 401 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 SLC39A3Q9BRY0 314 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 CLIC5Q9NZA1 410 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 TMX2Q9Y320 296 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 IKBKGQ9Y6K9 419 aa11.96□□□□□ -0.5
TM9SF2-201ENST00000376387 LYPLA2O95372 231 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 CCDC92Q53HC0 331 aaPredicted RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 TEX44Q53QW1 395 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 DCLK2Q8N568 766 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 NAT14Q8WUY8 206 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 DNAJC1Q96KC8 554 aaKnown RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 HAPLN3Q96S86 360 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 S100A14Q9HCY8 104 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 CCPG1Q9ULG6 757 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PCDHGB4Q9UN71 923 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PCDHGB5Q9Y5G0 923 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 ARHGAP42A6NI28 874 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PGM3O95394 542 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 C1QAP02745 245 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 WEE2P0C1S8 567 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 RFC1P35251 1148 aaPredicted RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 HSD17B4P51659 736 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 DGKZQ13574 1117 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 DPYSL3Q14195 570 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 TRIM72Q6ZMU5 477 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 CPXCR1Q8N123 301 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 JOSD2Q8TAC2 188 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 FAM172AQ8WUF8 416 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 E2F7Q96AV8 911 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 CENPKQ9BS16 269 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PREBQ9HCU5 417 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 SMYD2Q9NRG4 433 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 POLIQ9UNA4 740 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 UBIAD1Q9Y5Z9 338 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 LYPLA1O75608 230 aaPredicted RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 EPHB1P54762 984 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 CCNIQ14094 377 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 TTLL12Q14166 644 aaPredicted RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 FAXCQ5TGI0 409 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 FBXL19Q6PCT2 694 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 CEP170P1Q96L14 293 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 TAAR1Q96RJ0 339 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 BRD8Q9H0E9 1235 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PLAC1Q9HBJ0 212 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PCSK1NQ9UHG2 260 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 PLLPQ9Y342 182 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 TEX264Q9Y6I9 313 aa11.95□□□□□ -0.5
TM9SF2-201ENST00000376387 TCP10L2B9ZVM9 353 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 IMPDH2P12268 514 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 SP4Q02446 784 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 SLC25A11Q02978 314 aaKnown RBP11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 USP37Q86T82 979 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 EMC1Q8N766 993 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 SLC26A7Q8TE54 656 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 BRWD3Q6RI45 1802 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 I3L4J1 428 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 CST3P01034 146 aaPredicted RBP11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 PTPN7P35236 360 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 CLDN10P78369 228 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 MAP3K10Q02779 954 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 ASPHQ12797 758 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 HNRNPDQ14103 355 aaKnown RBP11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 PSMD6Q15008 389 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 DACT2Q5SW24 774 aa11.94□□□□□ -0.5
TM9SF2-201ENST00000376387 LRRC38Q5VT99 294 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms